RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 A0A087WZ62 844 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 KINO60870 393 aaKnown RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 NBNO60934 754 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 CSDE1O75534 798 aaKnown RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 CTSHP09668 335 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 SRGAP2CP0DJJ0 459 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 PLS3P13797 630 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 TMOD1P28289 359 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 NPTX2P47972 431 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 CASP5P51878 434 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 NCKAP1LP55160 1127 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 PEX3P56589 373 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 PTENP60484 403 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 ASIC1P78348 528 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 CAMK4Q16566 473 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 CDCA2Q69YH5 1023 aaPredicted RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 UNC13DQ70J99 1090 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 SFR1Q86XK3 245 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 C7orf61Q8IZ16 206 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 CAGE1Q8TC20 777 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 KIFAP3Q92845 792 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 OSMRQ99650 979 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 FDXACB1Q9BRP7 624 aaPredicted RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 NTPCRQ9BSD7 190 aaKnown RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 CELF4Q9BZC1 486 aaKnown RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 PPP1R12CQ9BZL4 782 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 CCDC113Q9H0I3 377 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 HIPK3Q9H422 1215 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 AGO3Q9H9G7 860 aaKnown RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 TMEM39AQ9NV64 488 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 PANK4Q9NVE7 773 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 TMEM63CQ9P1W3 806 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 ARHGAP28Q9P2N2 729 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 NOD1Q9Y239 953 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 PCDHA5Q9Y5H7 936 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 TRPV2Q9Y5S1 764 aa10.94□□□□□ -0.66
CLN8-202ENST00000517514 LAMA2P24043 3122 aaKnown RBP10.94□□□□□ -0.66
CLN8-202ENST00000517514 MICAL3Q7RTP6 2002 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 PVALEFA0A1B0GWK0 134 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 CAND2O75155 1236 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 PPP1R37O75864 691 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 TIMP1P01033 207 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 IDEP14735 1019 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 SELPP16109 830 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 BMP6P22004 513 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 FGFR4P22455 802 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 NMT1P30419 496 aaKnown RBP10.93□□□□□ -0.66
CLN8-202ENST00000517514 HOXD13P35453 343 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 DNM2P50570 870 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 CRYBB1P53674 252 aaPredicted RBP10.93□□□□□ -0.66
CLN8-202ENST00000517514 CCL23P55773 120 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 AMPD3Q01432 767 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 POU5F1BQ06416 359 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 MXD4Q14582 209 aaPredicted RBP10.93□□□□□ -0.66
CLN8-202ENST00000517514 LPIN1Q14693 890 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 AMHR2Q16671 573 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 FBXO47Q5MNV8 452 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 NT5DC1Q5TFE4 455 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 RBM43Q6ZSC3 357 aaKnown RBP10.93□□□□□ -0.66
CLN8-202ENST00000517514 LRRC8DQ7L1W4 858 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 RNF149Q8NC42 400 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 TMEM161BQ8NDZ6 487 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 SPIRE2Q8WWL2 714 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 KCNN1Q92952 543 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 SCLYQ96I15 445 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 DRC1Q96MC2 740 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 IKZF4Q9H2S9 585 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 PARVGQ9HBI0 331 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 USP20Q9Y2K6 914 aa10.93□□□□□ -0.66
CLN8-202ENST00000517514 NOC2LQ9Y3T9 749 aaKnown RBP10.93□□□□□ -0.66
CLN8-202ENST00000517514 SLC16A4O15374 487 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 ASAP2O43150 1006 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 RHOBTB3O94955 611 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 FAM13AO94988 1023 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 MBD3O95983 291 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 RPN1P04843 607 aaKnown RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 KRT18P05783 430 aaKnown RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 MYL1P05976 194 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 MYBP10242 640 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 MAPTP10636 758 aaKnown RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 DARSP14868 501 aaKnown RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 NAMPTP43490 491 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 KCNA1Q09470 495 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 STK4Q13043 487 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 BFSP2Q13515 415 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 ZC2HC1CQ53FD0 456 aaPredicted RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 ODR4Q5SWX8 454 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 EPM2AIP1Q7L775 607 aaPredicted RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 ZNF410Q86VK4 478 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 FAM228AQ86W67 206 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 MYCT1Q8N699 235 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 KIAA0895Q8NCT3 520 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms