RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 GAS7O60861 476 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 REC8O95072 547 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 RB1P06400 928 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 PSAPP07602 524 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 DARSP14868 501 aaKnown RBP9.75□□□□□ -0.85
PABPC1-202ENST00000517403 ME3Q16798 604 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 PTPROQ16827 1216 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 ECHDC2Q86YB7 292 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 SMAP1Q8IYB5 467 aaPredicted RBP9.75□□□□□ -0.85
PABPC1-202ENST00000517403 SMRP1Q8NCR6 262 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 ZNF274Q96GC6 653 aaPredicted RBP9.75□□□□□ -0.85
PABPC1-202ENST00000517403 RIT2Q99578 217 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 TEKT3Q9BXF9 490 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 SH3GLB2Q9NR46 395 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 TBC1D22BQ9NU19 505 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
PABPC1-202ENST00000517403 MUTYHQ9UIF7 546 aa9.75□□□□□ -0.85
PABPC1-202ENST00000517403 COL4A3Q01955 1670 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 A0A087WWV3 80 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 A0A087WZ62 844 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 NT5C1B-RDH14C9J2C7 533 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 F8W810 466 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 M0QZ92 97 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 PFKFB2O60825 505 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 FGF18O76093 207 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 DEXIO95424 95 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 SSRP1Q08945 709 aaKnown RBP9.74□□□□□ -0.85
PABPC1-202ENST00000517403 SMAD2Q15796 467 aaKnown RBP9.74□□□□□ -0.85
PABPC1-202ENST00000517403 UBXN11Q5T124 520 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 SYCE2Q6PIF2 218 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 SLC24A5Q71RS6 500 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 NME8Q8N427 588 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 CCDC148Q8NFR7 591 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 HELQQ8TDG4 1101 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 AUTS2Q8WXX7 1259 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 FDXACB1Q9BRP7 624 aaPredicted RBP9.74□□□□□ -0.85
PABPC1-202ENST00000517403 APOL5Q9BWW9 433 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 FTHL17Q9BXU8 183 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
PABPC1-202ENST00000517403 LMAN2LQ9H0V9 348 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 SMOC2Q9H3U7 446 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 IFT122Q9HBG6 1241 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 XPNPEP1Q9NQW7 623 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 PDRG1Q9NUG6 133 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 TMEM161AQ9NX61 479 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 RGL1Q9NZL6 768 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 AKT3Q9Y243 479 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 USP15Q9Y4E8 981 aaPredicted RBP9.74□□□□□ -0.85
PABPC1-202ENST00000517403 SAMM50Q9Y512 469 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 CYP46A1Q9Y6A2 500 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 STK36Q9NRP7 1315 aa9.74□□□□□ -0.85
PABPC1-202ENST00000517403 DENND3A2RUS2 1198 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 C2orf72A6NCS6 295 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 TTLL13PA6NNM8 815 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 EIF4BP23588 611 aaKnown RBP9.73□□□□□ -0.85
PABPC1-202ENST00000517403 PSMA5P28066 241 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 GNA11P29992 359 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 SSTR3P32745 418 aaPredicted RBP9.73□□□□□ -0.85
PABPC1-202ENST00000517403 PLA2G5P39877 138 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 USP11P51784 963 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 DUSP6Q16828 381 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 LETM2Q2VYF4 491 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 PLPP4Q5VZY2 271 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 MIER3Q7Z3K6 550 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 ADHFE1Q8IWW8 467 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 EFHBQ8N7U6 833 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 NSUN7Q8NE18 718 aaKnown RBP9.73□□□□□ -0.85
PABPC1-202ENST00000517403 GLT8D2Q9H1C3 349 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 CXCL16Q9H2A7 254 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 DNAJB4Q9UDY4 337 aa9.73□□□□□ -0.85
PABPC1-202ENST00000517403 DDX25Q9UHL0 483 aaKnown RBP9.73□□□□□ -0.85
PABPC1-202ENST00000517403 GPR37L1O60883 481 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 EYA4O95677 639 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 EDN1P05305 212 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 WEE2P0C1S8 567 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 SP100P23497 879 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-202ENST00000517403 JAK3P52333 1124 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 SMAD4Q13485 552 aaKnown RBP9.72□□□□□ -0.85
PABPC1-202ENST00000517403 NONOQ15233 471 aaKnown RBP eCLIP9.72□□□□□ -0.85
PABPC1-202ENST00000517403 TMEM31Q5JXX7 168 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 PIK3AP1Q6ZUJ8 805 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 HFE2Q6ZVN8 426 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 SLC39A11Q8N1S5 342 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 RNF169Q8NCN4 708 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-202ENST00000517403 SUSD6Q92537 303 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 PHOX2BQ99453 314 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 KIF2CQ99661 725 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 TMEM117Q9H0C3 514 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 TMEM60Q9H2L4 133 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 C1orf112Q9NSG2 853 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 CACNG4Q9UBN1 327 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 CD207Q9UJ71 328 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 PCDHB7Q9Y5E2 793 aa9.72□□□□□ -0.85
PABPC1-202ENST00000517403 LOC730098B7Z3J9 87 aa9.71□□□□□ -0.86
PABPC1-202ENST00000517403 GPR182O15218 404 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms