RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ZNF410Q86VK4 478 aa16.42■□□□□ 0.22
SCARNA20.5-201ENST00000516991 ZNF668Q96K58 619 aaPredicted RBP16.42■□□□□ 0.22
SCARNA20.5-201ENST00000516991 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
SCARNA20.5-201ENST00000516991 JPH2Q9BR39 696 aaPredicted RBP16.42■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TM6SF1Q9BZW5 370 aa16.42■□□□□ 0.22
SCARNA20.5-201ENST00000516991 INO80BQ9C086 356 aaPredicted RBP16.42■□□□□ 0.22
SCARNA20.5-201ENST00000516991 IGKV6-21A0A0C4DH24 114 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 M0R2N6 131 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TECP42680 631 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 SMC1AQ14683 1233 aaKnown RBP16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TRIM67Q6ZTA4 783 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TMC7Q7Z402 723 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 SLC39A11Q8N1S5 342 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 ETNPPLQ8TBG4 499 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 CASP10Q92851 521 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TRAIPQ9BWF2 469 aa16.41■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TMEM221A6NGB7 291 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 M0R296 226 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 DKC1O60832 514 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 CDKL5O76039 1030 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 FGFR4P22455 802 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 PSMC5P62195 406 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 ZXDAP98168 799 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 GJA10Q969M2 543 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 FBXL18Q96ME1 805 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
SCARNA20.5-201ENST00000516991 TRIOO75962 3097 aa16.39■□□□□ 0.22
SCARNA20.5-201ENST00000516991 HIDE1A8MVS5 230 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 STBD1O95210 358 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PBX3P40426 434 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PHKA2P46019 1235 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 ALDH7A1P49419 539 aaKnown RBP16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 RAB27AP51159 221 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NHLH1Q02575 133 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 DRP2Q13474 957 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NPY5RQ15761 445 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 TWF2Q6IBS0 349 aaKnown RBP16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 SUGP1Q8IWZ8 645 aaKnown RBP16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 TMEM169Q96HH4 297 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 FAM20AQ96MK3 541 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NAP1L4Q99733 375 aaKnown RBP16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PRRX2Q99811 253 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 S1PR5Q9H228 398 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 SUCLA2Q9P2R7 463 aaPredicted RBP16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PPME1Q9Y570 386 aa16.39■□□□□ 0.21
SCARNA20.5-201ENST00000516991 ZDBF2Q9HCK1 2354 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 A0A087WZ62 844 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 DDX11L8A8MPP1 907 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 MAFO75444 373 aaPredicted RBP16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 XBP1P17861 261 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 BCAR1P56945 870 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 LLGL2Q6P1M3 1020 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 SYCE2Q6PIF2 218 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 GLB1LQ6UWU2 654 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 MRPL43Q8N983 215 aaKnown RBP16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NECTIN4Q96NY8 510 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 FDXACB1Q9BRP7 624 aaPredicted RBP16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 STK36Q9NRP7 1315 aa16.38■□□□□ 0.21
SCARNA20.5-201ENST00000516991 CCDC194A0A1B0GVG4 234 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 TMEM150BA6NC51 233 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 C2orf71A6NGG8 1288 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 ZC3H11AO75152 810 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 ITIH3Q06033 890 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 STK3Q13188 491 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PPP2R5CQ13362 524 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PTPN21Q16825 1174 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 INF2Q27J81 1249 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 CES5AQ6NT32 575 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 CATSPER4Q7RTX7 472 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 SLC7A3Q8WY07 619 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 PBXIP1Q96AQ6 731 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NLRP4Q96MN2 994 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 CYP26B1Q9NR63 512 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 FAM105AQ9NUU6 356 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 DZANK1Q9NVP4 752 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NR2E1Q9Y466 385 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 HCFC2Q9Y5Z7 792 aa16.37■□□□□ 0.21
SCARNA20.5-201ENST00000516991 TBX3O15119 743 aa16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 SLC37A4O43826 429 aa16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 GAS2O43903 313 aaKnown RBP16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 ZNF623O75123 536 aa16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 CSDE1O75534 798 aaKnown RBP16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 RFC5P40937 340 aa16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 GIT2Q14161 759 aa16.36■□□□□ 0.21
SCARNA20.5-201ENST00000516991 NOMO2Q5JPE7 1267 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms