RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 NCDNQ9UBB6 729 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 UBE2QL1A1L167 161 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GAS7O60861 476 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 DNAJC8O75937 253 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ASMTLO95671 621 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 JUNP05412 331 aaKnown RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PTX3P26022 381 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MAN2A2P49641 1150 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PURAQ00577 322 aaKnown RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ZNF460Q14592 562 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ELAVL1Q15717 326 aaKnown RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CRB2Q5IJ48 1285 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 FKBP15Q5T1M5 1219 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SPTY2D1Q68D10 685 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MFSD5Q6N075 450 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SYNPOQ8N3V7 929 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 AMER2Q8N7J2 671 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 UIMC1Q96RL1 719 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MMRN2Q9H8L6 949 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 C14orf93Q9H972 538 aaKnown RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TOMM22Q9NS69 142 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MAGEC2Q9UBF1 373 aaPredicted RBP4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 DNAI1Q9UI46 699 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SPO11Q9Y5K1 396 aa4.2□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GOLGA6L6A8MZA4 724 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 OVOL3O00110 214 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CBX4O00257 560 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PPP1R12AO14974 1030 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 RFPL3O75679 317 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 IPO13O94829 963 aaKnown RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TOX4O94842 621 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PRPF6O94906 941 aaKnown RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 FSBPO95073 299 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PEX11BO96011 259 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 VSIG10L2P0DP72 767 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 NEK4P51957 841 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 INHBCP55103 352 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 NPEPPSP55786 919 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SMAD3P84022 425 aaKnown RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 DPTQ07507 201 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PABPC4Q13310 644 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SQSTM1Q13501 440 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SAFB2Q14151 953 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SART3Q15020 963 aaKnown RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TCEA2Q15560 299 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 NKD2Q969F2 451 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CHFRQ96EP1 664 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 HIST1H2AHQ96KK5 128 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 DRC1Q96MC2 740 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CEP89Q96ST8 783 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GPHA2Q96T91 129 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ELF4Q99607 663 aaPredicted RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 HIST1H2AJQ99878 128 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 IL23AQ9NPF7 189 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 INTS7Q9NVH2 962 aaKnown RBP4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 C11orf21Q9P2W6 132 aa4.19□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SDSP20132 328 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CD40P25942 277 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KIR2DL3P43628 341 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 IGFL4Q6B9Z1 124 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KIAA1841Q6NSI8 718 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CLEC14AQ86T13 490 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CMTM4Q8IZR5 234 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ATXN2LQ8WWM7 1075 aaKnown RBP4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CLIP3Q96DZ5 547 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 NOL10Q9BSC4 688 aaKnown RBP4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GPR87Q9BY21 358 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 EPC1Q9H2F5 836 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MTG2Q9H4K7 406 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TMEM260Q9NX78 707 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CEP72Q9P209 647 aa4.18□□□□□ -1.74
RNU6-1088P-201ENST00000516850 A0A087X1B8 175 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ST20-MTHFSA0A0A6YYL1 179 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 HNRNPLP14866 589 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GNAT2P19087 354 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PTGS2P35354 604 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MYBPC3Q14896 1274 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CCDC144BQ3MJ40 725 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KIF18BQ86Y91 864 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 HOMER1Q86YM7 354 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 RTF1Q92541 710 aaKnown RBP4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 UBXN4Q92575 508 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 FERMT2Q96AC1 680 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PRRX2Q99811 253 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MYL10Q9BUA6 226 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 OSBPL6Q9BZF3 934 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SLC2A4RGQ9NR83 387 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 OXSMQ9NWU1 459 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 XDHP47989 1333 aa4.17□□□□□ -1.74
RNU6-1088P-201ENST00000516850 A0A0A6YYJ9 748 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TMEM191CA6NGB0 347 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 NRP1O14786 923 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KPNA6O60684 536 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 OPHN1O60890 802 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 RPS6KA4O75676 772 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 XPAP23025 273 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SCNN1GP51170 649 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KPNA1P52294 538 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SMN1Q16637 294 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms