RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ATP2B2Q01814 1243 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 SCAPQ12770 1279 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 MOGSQ13724 837 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 TAF1CQ15572 869 aaPredicted RBP0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 BMT2Q1RMZ1 405 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 LRRFIP1Q32MZ4 808 aaKnown RBP0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 TMEM119Q4V9L6 283 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 INTS3Q68E01 1043 aaKnown RBP0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 KRTAP5-7Q6L8G8 165 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 GDF7Q7Z4P5 450 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 YTHDF3Q7Z739 585 aaKnown RBP0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 AMIGO2Q86SJ2 522 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 RELL1Q8IUW5 271 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 DNASE2BQ8WZ79 361 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 RNF34Q969K3 372 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 ARMC5Q96C12 935 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 PDLIM2Q96JY6 352 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 QTRT1Q9BXR0 403 aaKnown RBP0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 LRRC3Q9BY71 257 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 UBP1Q9NZI7 540 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 FLRT1Q9NZU1 646 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 APEX2Q9UBZ4 518 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 SUGT1Q9Y2Z0 365 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 CHST2Q9Y4C5 530 aa0.89□□□□□ -2.27
RNU6-557P-201ENST00000516842 SMAD6O43541 496 aaKnown RBP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 GREM1O60565 184 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 MAFKO60675 156 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 PPM1BO75688 479 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 LDHBP07195 334 aaKnown RBP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 GNAT2P19087 354 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 SFPQP23246 707 aaKnown RBP eCLIP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 BMPR1AP36894 532 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 RNASE9P60153 205 aaKnown RBP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 GRM1Q13255 1194 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 STILQ15468 1287 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 PRSS53Q2L4Q9 553 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 UBAP2Q5T6F2 1119 aaKnown RBP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 TMEM200BQ69YZ2 307 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 CYP4F22Q6NT55 531 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 Q6ZNX1 250 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 IRF2BP2Q7Z5L9 587 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 GPR149Q86SP6 731 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 BCL6BQ8N143 479 aaPredicted RBP0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 DBF4BQ8NFT6 615 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 ACTRT2Q8TDY3 377 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 NSMCE1Q8WV22 266 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 NDC1Q9BTX1 674 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 CD244Q9BZW8 370 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 SLC6A15Q9H2J7 730 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 HIPK2Q9H2X6 1198 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 SLCO5A1Q9H2Y9 848 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 NRIP3Q9NQ35 241 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 COPRSQ9NQ92 184 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 RNF181Q9P0P0 153 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 ARHGAP28Q9P2N2 729 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 NCDNQ9UBB6 729 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 FBXO10Q9UK96 956 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 RCAN3Q9UKA8 241 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 AKT3Q9Y243 479 aa0.88□□□□□ -2.27
RNU6-557P-201ENST00000516842 CFBP00751 764 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 ITGAVP06756 1048 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 P4HBP07237 508 aaKnown RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 CTSHP09668 335 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 EPHB2P29323 1055 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 HOXC13P31276 330 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 KRTAP12-2P59991 146 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 MRPS35P82673 323 aaKnown RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 TFF2Q03403 129 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 RESTQ13127 1097 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 TCIRG1Q13488 830 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 SEMA3AQ14563 771 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 LLGL1Q15334 1064 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 GNPTABQ3T906 1256 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 LEXMQ3ZCV2 418 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 ZNF585BQ52M93 769 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 PDCD4Q53EL6 469 aaKnown RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 DCAF17Q5H9S7 520 aaPredicted RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 KANK2Q63ZY3 851 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 GTF2IRD2BQ6EKJ0 949 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 IQCEQ6IPM2 695 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 DENND5AQ6IQ26 1287 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 MFSD5Q6N075 450 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 NEK8Q86SG6 692 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 GTF2IRD2Q86UP8 949 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 TAB3Q8N5C8 712 aaPredicted RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 ARL8AQ96BM9 186 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 RCC1LQ96I51 464 aaKnown RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 WNK4Q96J92 1243 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 UROC1Q96N76 676 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 AMNQ9BXJ7 453 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 GBP3Q9H0R5 595 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 VPS16Q9H269 839 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 INCENPQ9NQS7 918 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 TMEM260Q9NX78 707 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 GALNT8Q9NY28 637 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 LRIT1Q9P2V4 623 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 BIN2Q9UBW5 565 aaPredicted RBP0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 EFR3BQ9Y2G0 817 aa0.87□□□□□ -2.27
RNU6-557P-201ENST00000516842 MEFVO15553 781 aaPredicted RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms