RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 CATIPQ7Z7H3 387 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 MICU3Q86XE3 530 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CLEC10AQ8IUN9 316 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SLITRK4Q8IW52 837 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SMYD4Q8IYR2 804 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 LRRC47Q8N1G4 583 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 DNAJC5GQ8N7S2 189 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 JMYQ8N9B5 988 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PRPF38AQ8NAV1 312 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 KCT2Q8NC54 265 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SHCBP1Q8NEM2 672 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 REPS2Q8NFH8 660 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CTCFLQ8NI51 663 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SMARCC2Q8TAQ2 1214 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CHURC1Q8WUH1 139 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FBLIM1Q8WUP2 373 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 DHX38Q92620 1227 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GTF3C6Q969F1 213 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 UTP4Q969X6 686 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GAL3ST3Q96A11 431 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 INTS4Q96HW7 963 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TCEANC2Q96MN5 208 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FANCD2OSQ96PS1 177 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PARK7Q99497 189 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SLF1Q9BQI6 1058 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 LLPHQ9BRT6 129 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TINF2Q9BSI4 451 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SRRTQ9BXP5 876 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TEX13BQ9BXU2 312 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 RNF26Q9BY78 433 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 NRSN2Q9GZP1 204 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 WNT10AQ9GZT5 417 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 RANBP17Q9H2T7 1088 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 RPAP3Q9H6T3 665 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 RIOX1Q9H6W3 641 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SLC38A10Q9HBR0 1119 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 INCENPQ9NQS7 918 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 DISC1Q9NRI5 854 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PDRG1Q9NUG6 133 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 HOXC10Q9NYD6 342 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CLIP2Q9UDT6 1046 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 STK17AQ9UEE5 414 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 MAD2L2Q9UI95 211 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FEM1BQ9UK73 627 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PCOLCE2Q9UKZ9 415 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF214Q9UL59 606 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FZD1Q9UP38 647 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 LIMCH1Q9UPQ0 1083 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 RABGAP1Q9Y3P9 1069 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 KIF3AQ9Y496 699 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CEP350Q5VT06 3117 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF236Q9UL36 1845 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ZNF536O15090 1300 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 FAM95CA0A1B0GW59 222 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ESYT2A0FGR8 921 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 UPK3BL1B0FP48 263 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 C1QTNF9BB2RNN3 333 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CHURC1-FNTBB4DL54 471 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TMEM232C9JQI7 657 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KLRF2D3W0D1 207 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 UPK3BL2E5RIL1 263 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 K7ELQ4 463 aaPredicted RBP2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PDHXO00330 501 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 GFRA2O00451 464 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TMPRSS2O15393 492 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PRPF3O43395 683 aaKnown RBP2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CYTH3O43739 400 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 FLOT1O75955 427 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 HTR3BO95264 441 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PLEKHA8P1O95397 391 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 DEXIO95424 95 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SLC25A27O95847 323 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ICAM1P05362 532 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NFICP08651 508 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CPA1P15085 419 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 RAG1P15918 1043 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 GBP1P32455 592 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 GATA4P43694 442 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PREPP48147 710 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 GJA8P48165 433 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ERVK-24P63145 666 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CCNA1P78396 465 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 IRX3P78415 501 aaPredicted RBP2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KIF23Q02241 960 aaPredicted RBP2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ST3GAL1Q11201 340 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SCRN1Q12765 414 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 COG2Q14746 738 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CDC37Q16543 378 aaPredicted RBP2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 ME3Q16798 604 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CCDC96Q2M329 555 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 SLC35G1Q2M3R5 365 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 KIAA1755Q5JYT7 1200 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 FAM83BQ5T0W9 1011 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 TREML2Q5T2D2 321 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 MCTP2Q6DN12 878 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 CDPF1Q6NVV7 123 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 PAOXQ6QHF9 649 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 C17orf99Q6UX52 265 aa2.52□□□□□ -2.01
SCARNA16.3-201ENST00000516595 NFXL1Q6ZNB6 911 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms