RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PSMC2P35998 433 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ARL2P36404 184 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 NAMPTP43490 491 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 LACTBP83111 547 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 LRMPQ12912 555 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TRIM14Q14142 442 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MYBPC2Q14324 1141 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 KIF22Q14807 665 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ARID5BQ14865 1188 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ZNF484Q5JVG2 852 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 IER5Q5VY09 327 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CEP135Q66GS9 1140 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ARMCX5Q6P1M9 558 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FRMD5Q7Z6J6 570 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SLC9A9Q8IVB4 645 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TRIM59Q8IWR1 403 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TMEM161BQ8NDZ6 487 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TMEM143Q96AN5 459 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 NDST4Q9H3R1 872 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 METTL14Q9HCE5 456 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 AGPAT3Q9NRZ7 376 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ZNF215Q9UL58 517 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FAM184BQ9ULE4 1060 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TBX20Q9UMR3 447 aa8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCARNA20.1-201ENST00000516009 COL1A2P08123 1366 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 LRRIQ4A6NIV6 560 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ZBTB42B2RXF5 422 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 AKR1B15C9JRZ8 316 aaPredicted RBP8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 H3BRB1 525 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 DYNC1LI2O43237 492 aaPredicted RBP8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 EXOC3O60645 756 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 AKAP3O75969 853 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MMP3P08254 477 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ZNF286BP0CG31 522 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 GLRA2P23416 452 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MAP2K2P36507 400 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CASP4P49662 377 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CYP2J2P51589 502 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SP3Q02447 781 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 STRN3Q13033 797 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SYCP1Q15431 976 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 DGKDQ16760 1214 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TLK2Q86UE8 772 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MAP4K3Q8IVH8 894 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 C12orf56Q8IXR9 622 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FAM186BQ8IYM0 893 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CCDC112Q8NEF3 446 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 DEPTORQ8TB45 409 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ASAP3Q8TDY4 903 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 PSPC1Q8WXF1 523 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ERGIC2Q96RQ1 377 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 C16orf70Q9BSU1 422 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 KIFC3Q9BVG8 833 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 NUP58Q9BVL2 599 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 IKZF4Q9H2S9 585 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 RNPEPQ9H4A4 650 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TUT1Q9H6E5 874 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SUGCTQ9HAC7 445 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 DMAC2Q9NW81 257 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ARHGAP28Q9P2N2 729 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 GNEQ9Y223 722 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FRMD4BQ9Y2L6 1034 aa8.37□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ADGRA3Q8IWK6 1321 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 IGKV6-21A0A0C4DH24 114 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 A6NJR5 290 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 HNRNPDLO14979 420 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MAGEB2O15479 319 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 ADCY6O43306 1168 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MFAP3LO75121 409 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TBC1D8O95759 1140 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 IGHA2P01877 340 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 AFPP02771 609 aaKnown RBP8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 GYPCP04921 128 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 SKILP12757 684 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 INSRRP14616 1297 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 FLT3LGP49771 235 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CPT1AP50416 773 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 IGBP1P78318 339 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CCZ1BP86790 482 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CCZ1P86791 482 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 RBL2Q08999 1139 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 MXD4Q14582 209 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 BRDTQ58F21 947 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TC2NQ8N9U0 490 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 RETREG2Q8NC44 543 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TMEM174Q8WUU8 243 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 CPLX3Q8WVH0 158 aa8.36□□□□□ -1.07
SCARNA20.1-201ENST00000516009 TRAPPC12Q8WVT3 735 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms