RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SAAL1Q96ER3 474 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 SAYSD1Q9NPB0 183 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 SNAP23O00161 211 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 DDX50Q9BQ39 737 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 TMEM260Q9NX78 707 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 CDV3Q9UKY7 258 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 CAPN11Q9UMQ6 739 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 NMT2O60551 498 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 DDHD2O94830 711 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 AIFM3Q96NN9 605 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 TRIM15Q9C019 465 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 STAP1Q9ULZ2 295 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 C2CD2LO14523 706 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 CYP2E1P05181 493 aaPredicted RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 SLC7A5Q01650 507 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 DR1Q01658 176 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 EFHC2Q5JST6 749 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 PRAMEF18Q5VWM3 479 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 RAPGEF5Q92565 580 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 TRIM54Q9BYV2 358 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 LSM7Q9UK45 103 aaKnown RBP11.75□□□□□ -0.53
TRIM41-209ENST00000515834 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
TRIM41-209ENST00000515834 MYO1DO94832 1006 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 AP3B2Q13367 1082 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 KRT80Q6KB66 452 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CNOT8Q9UFF9 292 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 RNF123Q5XPI4 1314 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 SDC4P31431 198 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 RWDD2BP57060 319 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CCNYL1Q8N7R7 359 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CENPKQ9BS16 269 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 ZCWPW1Q9H0M4 648 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 DHX35Q9H5Z1 703 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 SCAF8Q9UPN6 1271 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 ARHGAP10A1A4S6 786 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 RASGRF2O14827 1237 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 PSMC1P62191 440 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 ZFYVE19Q96K21 471 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 RWDD2AQ9UIY3 292 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 KRT76Q01546 638 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 MEI1Q5TIA1 1274 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 SAMSN1Q9NSI8 373 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 PAGE5Q96GU1 130 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 UPF3AQ9H1J1 476 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 TTC7AQ9ULT0 858 aaPredicted RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 RARBP10826 455 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 NSUN7Q8NE18 718 aaKnown RBP11.74□□□□□ -0.53
TRIM41-209ENST00000515834 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 PBKQ96KB5 322 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 C11orf70Q9BRQ4 267 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 MUC3BQ9H195 1237 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
TRIM41-209ENST00000515834 SOWAHDA6NJG2 315 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 EEF1DP29692 281 aaKnown RBP11.73□□□□□ -0.53
TRIM41-209ENST00000515834 AKT1P31749 480 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 PRKCQQ04759 706 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 COL15A1P39059 1388 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 MAP4P27816 1152 aaKnown RBP11.73□□□□□ -0.53
TRIM41-209ENST00000515834 SPDYE7PQ495Y7 208 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 SELENONQ9NZV5 590 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 PACSIN2Q9UNF0 486 aaPredicted RBP11.73□□□□□ -0.53
TRIM41-209ENST00000515834 PCDHB7Q9Y5E2 793 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 TRAPPC3O43617 180 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 GNA15P30679 374 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 LIG3P49916 1009 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 IFT88Q13099 833 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 SMIM5Q71RC9 77 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 CRLF3Q8IUI8 442 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 ATXN7L3BQ96GX2 97 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 PDE11AQ9HCR9 933 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 AIPL1Q9NZN9 384 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 ARIH2O95376 493 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 ESRRGP62508 458 aa11.73□□□□□ -0.53
TRIM41-209ENST00000515834 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms