RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DMRT1Q9Y5R6 373 aa5.85□□□□□ -1.47
LINC01088-211ENST00000515597 UBA6A0AVT1 1052 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-211ENST00000515597 PPP1R12AO14974 1030 aaPredicted RBP5.84□□□□□ -1.47
LINC01088-211ENST00000515597 RAMP2O60895 175 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 FAM20BO75063 409 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 PRAMEF9Q5VWM5 478 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 CLEC14AQ86T13 490 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 SYNPOQ8N3V7 929 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 CHST14Q8NCH0 376 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 PGBD4Q96DM1 585 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 DYDC2Q96IM9 177 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 MAML3Q96JK9 1138 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 GPR87Q9BY21 358 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 PCIF1Q9H4Z3 704 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 NRDE2Q9H7Z3 1164 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 DNAI1Q9UI46 699 aa5.84□□□□□ -1.47
LINC01088-211ENST00000515597 TNPO3Q9Y5L0 923 aaKnown RBP5.84□□□□□ -1.47
LINC01088-211ENST00000515597 PCSK5Q92824 1860 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 TRAF5O00463 557 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 OPA1O60313 960 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 TOX4O94842 621 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 PEX11BO96011 259 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 ZNF460Q14592 562 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 KRT40Q6A162 431 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 DNAJC10Q8IXB1 793 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 MB21D1Q8N884 522 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 ZG16BQ96DA0 208 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 WDR92Q96MX6 357 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 TCF25Q9BQ70 676 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 POLR3BQ9NW08 1133 aaPredicted RBP5.83□□□□□ -1.48
LINC01088-211ENST00000515597 RCAN3Q9UKA8 241 aa5.83□□□□□ -1.48
LINC01088-211ENST00000515597 ASMTLO95671 621 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 HNRNPLP14866 589 aaKnown RBP eCLIP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 SDSP20132 328 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 PTX3P26022 381 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 RABGGTBP53611 331 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 FSTL1Q12841 308 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 PABPC4Q13310 644 aaKnown RBP eCLIP5.82□□□□□ -1.482e-7■□□□□ 10.4
LINC01088-211ENST00000515597 MYBPC3Q14896 1274 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 TTC38Q5R3I4 469 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 FKBP15Q5T1M5 1219 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 GSPT2Q8IYD1 628 aaKnown RBP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 ELOA2Q8IYF1 753 aaPredicted RBP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 RPUSD2Q8IZ73 545 aaKnown RBP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 PLA2G15Q8NCC3 412 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 RNPC3Q96LT9 517 aaKnown RBP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 PRRX2Q99811 253 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 INTS7Q9NVH2 962 aaKnown RBP5.82□□□□□ -1.48
LINC01088-211ENST00000515597 KCMF1Q9P0J7 381 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 NCDNQ9UBB6 729 aa5.82□□□□□ -1.48
LINC01088-211ENST00000515597 PTPDC1A2A3K4 754 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 KLRG2A4D1S0 409 aaPredicted RBP5.81□□□□□ -1.48
LINC01088-211ENST00000515597 VSIG10L2P0DP72 767 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 GAGE13Q4V321 117 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 ZNF662Q6ZS27 426 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 NPM2Q86SE8 214 aaKnown RBP5.81□□□□□ -1.48
LINC01088-211ENST00000515597 ULK2Q8IYT8 1036 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 KIAA1958Q8N8K9 716 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 C16orf92Q96LL3 132 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 TUBGCP5Q96RT8 1024 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 ORAI3Q9BRQ5 295 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 CABP5Q9NP86 173 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 ACSS2Q9NR19 701 aa5.81□□□□□ -1.48
LINC01088-211ENST00000515597 XDHP47989 1333 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 H7C1D1 291 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 CBX4O00257 560 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 FOXN1O15353 648 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 FLT3P36888 993 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 TCEA2Q15560 299 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 PIK3R6Q5UE93 754 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 C1QL3Q5VWW1 255 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 ATXN2LQ8WWM7 1075 aaKnown RBP5.8□□□□□ -1.48
LINC01088-211ENST00000515597 CRAMP1Q96RY5 1269 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
LINC01088-211ENST00000515597 B4GALT6Q9UBX8 382 aa5.8□□□□□ -1.48
LINC01088-211ENST00000515597 STC2O76061 302 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 JMJD7P0C870 316 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 SMAD3P84022 425 aaKnown RBP5.79□□□□□ -1.48
LINC01088-211ENST00000515597 COL10A1Q03692 680 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 RABL3Q5HYI8 236 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 CDCA2Q69YH5 1023 aaPredicted RBP5.79□□□□□ -1.48
LINC01088-211ENST00000515597 LAIR1Q6GTX8 287 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 ESRP1Q6NXG1 681 aaKnown RBP5.79□□□□□ -1.48
LINC01088-211ENST00000515597 UBE2R2Q712K3 238 aaPredicted RBP5.79□□□□□ -1.48
LINC01088-211ENST00000515597 BMP8AQ7Z5Y6 402 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 MRGPREQ86SM8 312 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 HOMER1Q86YM7 354 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 SLC25A43Q8WUT9 341 aaPredicted RBP5.79□□□□□ -1.48
LINC01088-211ENST00000515597 ARL8AQ96BM9 186 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 ZNF512Q96ME7 567 aaPredicted RBP5.79□□□□□ -1.48
LINC01088-211ENST00000515597 HAPLN2Q9GZV7 340 aa5.79□□□□□ -1.48
LINC01088-211ENST00000515597 PPFIA2O75334 1257 aa5.78□□□□□ -1.48
LINC01088-211ENST00000515597 APOL3O95236 402 aa5.78□□□□□ -1.48
LINC01088-211ENST00000515597 CYP17A1P05093 508 aa5.78□□□□□ -1.48
LINC01088-211ENST00000515597 JUNP05412 331 aaKnown RBP5.78□□□□□ -1.48
LINC01088-211ENST00000515597 SLC9A1P19634 815 aa5.78□□□□□ -1.48
LINC01088-211ENST00000515597 PTGS2P35354 604 aa5.78□□□□□ -1.48
LINC01088-211ENST00000515597 RANGAP1P46060 587 aaPredicted RBP5.78□□□□□ -1.48
LINC01088-211ENST00000515597 EPHA7Q15375 998 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms