RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
COPB2-212ENST00000514508 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 CALML4Q96GE6 196 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 FAM161BQ96MY7 647 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 PNMA5Q96PV4 448 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 POLR3FQ9H1D9 316 aaPredicted RBP13.77□□□□□ -0.21
COPB2-212ENST00000514508 CHST12Q9NRB3 414 aa13.77□□□□□ -0.21
COPB2-212ENST00000514508 SRPRBQ9Y5M8 271 aaKnown RBP13.77□□□□□ -0.21
COPB2-212ENST00000514508 MGEA5O60502 916 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 CSDE1O75534 798 aaKnown RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 GLRA2P23416 452 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 MARCKSP29966 332 aaPredicted RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 PTENP60484 403 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 GRIN1Q05586 938 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 GRB10Q13322 594 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 STK38Q15208 465 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 PCBP1Q15365 356 aaKnown RBP eCLIP13.76□□□□□ -0.21
COPB2-212ENST00000514508 FAM102BQ5T8I3 360 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 MAEAQ7L5Y9 396 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 CATSPER4Q7RTX7 472 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 CRIPAKQ8N1N5 446 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 ASAP3Q8TDY4 903 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 FOXD4L4Q8WXT5 416 aaPredicted RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 CCSER1Q9C0I3 900 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 DACT1Q9NYF0 836 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 FBXO2Q9UK22 296 aaPredicted RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 LRFN2Q9ULH4 789 aa13.76□□□□□ -0.21
COPB2-212ENST00000514508 LAMA2P24043 3122 aaKnown RBP13.76□□□□□ -0.21
COPB2-212ENST00000514508 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 MYH11P35749 1972 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 C9IYK1 514 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 FGFR4P22455 802 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 FAM189BP81408 668 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 TAP1Q03518 808 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 PKP1Q13835 747 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 CAPSQ13938 189 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 SYT2Q8N9I0 419 aaPredicted RBP13.75□□□□□ -0.21
COPB2-212ENST00000514508 KRI1Q8N9T8 703 aaKnown RBP13.75□□□□□ -0.21
COPB2-212ENST00000514508 LINC00301Q8NCQ3 95 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 KIFAP3Q92845 792 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 ELAC1Q9H777 363 aaKnown RBP13.75□□□□□ -0.21
COPB2-212ENST00000514508 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
COPB2-212ENST00000514508 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 PPP6R2O75170 966 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 DGKIO75912 1065 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 YEATS4O95619 227 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 BRD1O95696 1058 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 GRIN2CQ14957 1233 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 PPP2R5AQ15172 486 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 RINT1Q6NUQ1 792 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 PLIN2Q99541 437 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
COPB2-212ENST00000514508 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 TRAIPQ9BWF2 469 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 MINDY3Q9H8M7 445 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 RC3H2Q9HBD1 1191 aaKnown RBP13.74□□□□□ -0.21
COPB2-212ENST00000514508 AGPAT5Q9NUQ2 364 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 TMEM161AQ9NX61 479 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 KCND2Q9NZV8 630 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 TFIP11Q9UBB9 837 aaKnown RBP13.74□□□□□ -0.21
COPB2-212ENST00000514508 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 CFAP45Q9UL16 551 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
COPB2-212ENST00000514508 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
COPB2-212ENST00000514508 ADGRA3Q8IWK6 1321 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 LINC01553A4QN01 128 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 LRRIQ4A6NIV6 560 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 SPTLC2O15270 562 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 ERLIN2O94905 339 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 ARHGEF15O94989 841 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 SLC34A2O95436 690 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 PLA2G4BP0C869 781 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 TXLNAP40222 546 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 NAMPTP43490 491 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
COPB2-212ENST00000514508 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
COPB2-212ENST00000514508 TWF2Q6IBS0 349 aaKnown RBP13.73□□□□□ -0.21
COPB2-212ENST00000514508 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 ZBTB8OSQ8IWT0 167 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 ZNF689Q96CS4 500 aaPredicted RBP13.73□□□□□ -0.21
COPB2-212ENST00000514508 EPSTI1Q96J88 318 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms