RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CLLU1OSQ5K130 101 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 PTCRAQ6ISU1 281 aaPredicted RBP11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 LRRC43Q8N309 656 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 MTMR9Q96QG7 549 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 TRAIPQ9BWF2 469 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 INO80BQ9C086 356 aaPredicted RBP11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 ZSWIM4Q9H7M6 989 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 IFT122Q9HBG6 1241 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 AAASQ9NRG9 546 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 CLDND1Q9NY35 253 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 PCDHB12Q9Y5F1 795 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 COL4A3BPQ9Y5P4 624 aa11.7□□□□□ -0.54
HMGXB3-205ENST00000514469 TBX10O75333 385 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 FGF18O76093 207 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 SLITRK3O94933 977 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 LYPLA2O95372 231 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 EOMESO95936 686 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 IL9P15248 144 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 PHKA2P46019 1235 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 CTTNQ14247 550 aaKnown RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 EMC2Q15006 297 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 SPOUT1Q5T280 376 aaKnown RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 LRRC55Q6ZSA7 311 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 ADGRD2Q7Z7M1 963 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 PPP2R3CQ969Q6 453 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 ZSCAN31Q96LW9 406 aaPredicted RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 NLRP4Q96MN2 994 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 EIF2AK1Q9BQI3 630 aaKnown RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 SH2B1Q9NRF2 756 aaPredicted RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 PCDHA12Q9UN75 941 aa11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 PIN4Q9Y237 131 aaKnown RBP11.69□□□□□ -0.54
HMGXB3-205ENST00000514469 FSCN2O14926 492 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 ZBTB39O15060 712 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 LINC01565O15544 149 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 HMGN5P82970 282 aaKnown RBP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 PLCB3Q01970 1234 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 GUCY1B3Q02153 619 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 ADAM15Q13444 863 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 SAFBQ15424 915 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 CATSPER4Q7RTX7 472 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 TPH2Q8IWU9 490 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 THNSL1Q8IYQ7 743 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 EFHBQ8N7U6 833 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 PRPF31Q8WWY3 499 aaKnown RBP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 PSPC1Q8WXF1 523 aaKnown RBP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 RSPH1Q8WYR4 309 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 MRPL9Q9BYD2 267 aaKnown RBP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 TMEM60Q9H2L4 133 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 XPNPEP1Q9NQW7 623 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 AGPAT5Q9NUQ2 364 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 PCDHGC5Q9Y5F6 944 aa11.68□□□□□ -0.54
HMGXB3-205ENST00000514469 TCF20Q9UGU0 1960 aaKnown RBP11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 POTEMA6NI47 508 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 SKIP12755 728 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 PPM1AP35813 382 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 TXKP42681 527 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 RAB27AP51159 221 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 LAMTOR4Q0VGL1 99 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 ORC2Q13416 577 aaPredicted RBP11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 TWF2Q6IBS0 349 aaKnown RBP11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 EP400NLQ6ZTU2 488 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 FBXO18Q8NFZ0 1043 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 TCP11Q8WWU5 503 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 ZNF558Q96NG5 402 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 MTRQ99707 1265 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 IGFLR1Q9H665 355 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 MINDY3Q9H8M7 445 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 ANKEF1Q9NU02 776 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 FAM105AQ9NUU6 356 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
HMGXB3-205ENST00000514469 ASAP2O43150 1006 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 MBTPS2O43462 519 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 ZNF623O75123 536 aa11.66□□□□□ -0.54
HMGXB3-205ENST00000514469 GLP2RO95838 553 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms