RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 HOMEZQ8IX15 550 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ARL8AQ96BM9 186 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 BZW2Q9Y6E2 419 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 PHF20L1A8MW92 1017 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CD58P19256 250 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CDC42EP5Q6NZY7 148 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 ARHGEF18Q6ZSZ5 1173 aa14.11□□□□□ -0.15
TCOF1-213ENST00000514442 CHCHD3Q9NX63 227 aaKnown RBP14.11□□□□□ -0.15
TCOF1-213ENST00000514442 MST1RQ04912 1400 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 CTCFP49711 727 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 IRX4P78413 519 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 RNASELQ05823 741 aaKnown RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 ST13P4Q8IZP2 240 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 ANKRD36BP1Q96IX9 119 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 CHP1Q99653 195 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 PTPN22Q9Y2R2 807 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 RASGRF2O14827 1237 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 NCK2O43639 380 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 ATP6V1G2O95670 118 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 PLTPP55058 493 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 SCARA5Q6ZMJ2 495 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 CCDC110Q8TBZ0 833 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 FAM210AQ96ND0 272 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 RIOK1Q9BRS2 568 aaKnown RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 MTMR4Q9NYA4 1195 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 H0Y3Z8 333 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 DNAJC8O75937 253 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 MYCP01106 439 aaPredicted RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 COASYQ13057 564 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 HADHQ16836 314 aaKnown RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 LIMA1Q9UHB6 759 aaKnown RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 GOLGA8SH3BPF8 625 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
TCOF1-213ENST00000514442 ITIH3Q06033 890 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 PPP1R18Q6NYC8 613 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 CFAP61Q8NHU2 1237 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 LRRC8CQ8TDW0 803 aa14.1□□□□□ -0.15
TCOF1-213ENST00000514442 CCDC188H7C350 402 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 GYPCP04921 128 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 SLCO1A2P46721 670 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 PAPOLAP51003 745 aaKnown RBP14.09□□□□□ -0.15
TCOF1-213ENST00000514442 KLC1Q07866 573 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 YTHDF3Q7Z739 585 aaKnown RBP14.09□□□□□ -0.15
TCOF1-213ENST00000514442 PIK3R5Q8WYR1 880 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 AP1M1Q9BXS5 423 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 SALL3Q9BXA9 1300 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 AGBL2Q5U5Z8 902 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 STRIP1Q5VSL9 837 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 PADI6Q6TGC4 694 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 OTUD5Q96G74 571 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 ANGPTL2Q9UKU9 493 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 CAPN11Q9UMQ6 739 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 A0A1W2PQC6 194 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 PALMO75781 387 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 ATP2C1P98194 919 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-213ENST00000514442 KSR1Q8IVT5 923 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 TMEM154Q6P9G4 183 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 NME8Q8N427 588 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 RPS6KC1Q96S38 1066 aa14.09□□□□□ -0.15
TCOF1-213ENST00000514442 FAM49AQ9H0Q0 323 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-213ENST00000514442 FBXO2Q9UK22 296 aaPredicted RBP14.09□□□□□ -0.15
TCOF1-213ENST00000514442 CASQ2O14958 399 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 MSH2P43246 934 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 ANKRD20A8PQ5CZ79 823 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 CTAGE3PQ8IX95 158 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 DDX23Q9BUQ8 820 aaKnown RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 ZFATQ9P243 1243 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 MAPK13O15264 365 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 FCER1AP12319 257 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 POLR2BP30876 1174 aaKnown RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 SKOR1P84550 965 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 MICALL2Q8IY33 904 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 GDAP1Q8TB36 358 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 TEKT4Q8WW24 435 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 Q9H521 79 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 NUB1Q9Y5A7 615 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 K7ERI5 159 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 FDPSP14324 419 aaKnown RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 RASA1P20936 1047 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 ST3GAL1Q11201 340 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 SBK1Q52WX2 424 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 TRIM50Q86XT4 487 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 SCYL3Q8IZE3 742 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 ZNF668Q96K58 619 aaPredicted RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 TUBB6Q9BUF5 446 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 MSTO1Q9BUK6 570 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 PHF20Q9BVI0 1012 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 SPZ1Q9BXG8 430 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 ETNK1Q9HBU6 452 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 A1CFQ9NQ94 594 aaKnown RBP14.08□□□□□ -0.16
TCOF1-213ENST00000514442 SEPT10Q9P0V9 454 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 FBXL5Q9UKA1 691 aa14.08□□□□□ -0.16
TCOF1-213ENST00000514442 SLC16A4O15374 487 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms