RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GPR153Q6NV75 609 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 CCDC73Q6ZRK6 1079 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 TET1Q8NFU7 2136 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 SNX29Q8TEQ0 813 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 PRPF31Q8WWY3 499 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 SLC9A7Q96T83 725 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 MMTAG2Q9BU76 263 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 FTHL17Q9BXU8 183 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 GCOM2Q9BZD3 368 aaPredicted RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 INO80BQ9C086 356 aaPredicted RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 AGO3Q9H9G7 860 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 PADI3Q9ULW8 664 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 ST3GAL5Q9UNP4 418 aa9.24□□□□□ -0.93
CCL28-204ENST00000514421 NOC2LQ9Y3T9 749 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 SRPRBQ9Y5M8 271 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 MYH9P35579 1960 aaKnown RBP9.24□□□□□ -0.93
CCL28-204ENST00000514421 PP2D1A8MPX8 630 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 GRXCR1A8MXD5 290 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 EYA4O95677 639 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 AMHP03971 560 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 CYP11B2P19099 503 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 MARCKSP29966 332 aaPredicted RBP9.23□□□□□ -0.93
CCL28-204ENST00000514421 CD52P31358 61 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 ARL2P36404 184 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 NDUFA8P51970 172 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 WDR5P61964 334 aaKnown RBP9.23□□□□□ -0.93
CCL28-204ENST00000514421 TYRO3Q06418 890 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 PAK2Q13177 524 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 DRP2Q13474 957 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 MXD4Q14582 209 aaPredicted RBP9.23□□□□□ -0.93
CCL28-204ENST00000514421 EMC2Q15006 297 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 ZRSR1Q15695 479 aaKnown RBP9.23□□□□□ -0.93
CCL28-204ENST00000514421 RAB30Q15771 203 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 POTEGQ6S5H5 508 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 PADI6Q6TGC4 694 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCL28-204ENST00000514421 RTN4RL1Q86UN2 441 aaPredicted RBP9.23□□□□□ -0.93
CCL28-204ENST00000514421 ZNF410Q86VK4 478 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 RHPN2Q8IUC4 686 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 FSIP1Q8NA03 581 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 NLRP7Q8WX94 980 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 PSPC1Q8WXF1 523 aaKnown RBP9.23□□□□□ -0.93
CCL28-204ENST00000514421 TMEM143Q96AN5 459 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 PPP1R16BQ96T49 567 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 OSMRQ99650 979 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 MTRQ99707 1265 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 ATP6V0A4Q9HBG4 840 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 XPNPEP1Q9NQW7 623 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 MSRAQ9UJ68 235 aa9.23□□□□□ -0.93
CCL28-204ENST00000514421 A0A087WZ62 844 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 ARHGEF35A5YM69 484 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 E9PMD0 336 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 KINO60870 393 aaKnown RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 SRGAP2CP0DJJ0 459 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 DARSP14868 501 aaKnown RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 POU5F1BQ06416 359 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 LAMTOR4Q0VGL1 99 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 HYIQ5T013 277 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 FAM109BQ6ICB4 259 aaPredicted RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 SHC4Q6S5L8 630 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 CABP7Q86V35 215 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 KSR1Q8IVT5 923 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 HERC6Q8IVU3 1022 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 KRI1Q8N9T8 703 aaKnown RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 MCPH1Q8NEM0 835 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 ANP32BQ92688 251 aaKnown RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 TOP1MTQ969P6 601 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 CALML4Q96GE6 196 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 LRCH3Q96II8 777 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 CDK5RAP3Q96JB5 506 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 ZNF668Q96K58 619 aaPredicted RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 SCLT1Q96NL6 688 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 PNMA5Q96PV4 448 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 FDXACB1Q9BRP7 624 aaPredicted RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 ZBED2Q9BTP6 218 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 CCSER1Q9C0I3 900 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 BHMT2Q9H2M3 363 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 ERVK-5Q9HDB9 667 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
CCL28-204ENST00000514421 PCDHA11Q9Y5I1 949 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 COL4A3BPQ9Y5P4 624 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 MYO9BQ13459 2157 aa9.22□□□□□ -0.93
CCL28-204ENST00000514421 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.94
CCL28-204ENST00000514421 USO1O60763 962 aaKnown RBP9.21□□□□□ -0.94
CCL28-204ENST00000514421 ZNF202O95125 648 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 GJB5O95377 273 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 PFKFB1P16118 471 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 ZSCAN20P17040 1043 aaPredicted RBP9.21□□□□□ -0.94
CCL28-204ENST00000514421 RABGGTBP53611 331 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 PTENP60484 403 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 FAM189BP81408 668 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 DEFB103AP81534 67 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 GRIN1Q05586 938 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 GRB10Q13322 594 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms