RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 TIPINQ9BVW5 301 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 OSBPL7Q9BZF2 842 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 POLD4Q9HCU8 107 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 XPNPEP1Q9NQW7 623 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
SNF8-212ENST00000514089 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 STK17AQ9UEE5 414 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 KCNG1Q9UIX4 513 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 MSRAQ9UJ68 235 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 DOCK5Q9H7D0 1870 aa16.1■□□□□ 0.17
SNF8-212ENST00000514089 INO80B-WBP1J3KQ70 363 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 ERLIN2O94905 339 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 LIG1P18858 919 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 FGFR4P22455 802 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
SNF8-212ENST00000514089 MCM6Q14566 821 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 CSPP1Q1MSJ5 1256 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 FAM117BQ6P1L5 589 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 FAM43BQ6ZT52 329 aaPredicted RBP16.09■□□□□ 0.17
SNF8-212ENST00000514089 IQUBQ8NA54 791 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 ASAP3Q8TDY4 903 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 TMEM40Q8WWA1 233 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 LARP4BQ92615 738 aaKnown RBP16.09■□□□□ 0.17
SNF8-212ENST00000514089 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 SLC9A7Q96T83 725 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
SNF8-212ENST00000514089 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 LRFN2Q9ULH4 789 aa16.09■□□□□ 0.17
SNF8-212ENST00000514089 ENPP3O14638 875 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 TNRC18O15417 2968 aaPredicted RBP16.08■□□□□ 0.16
SNF8-212ENST00000514089 HIP1RO75146 1068 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 GLRA2P23416 452 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 SMTNP53814 917 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 SLC12A3P55017 1021 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 DMP1Q13316 513 aaPredicted RBP16.08■□□□□ 0.16
SNF8-212ENST00000514089 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNF8-212ENST00000514089 C1orf186Q6ZWK4 172 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 FAM228AQ86W67 206 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 DHX58Q96C10 678 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 VWCEQ96DN2 955 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
SNF8-212ENST00000514089 ADAM2Q99965 735 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 LRRC27Q9C0I9 530 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 C2orf40Q9H1Z8 148 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 GDPD2Q9HCC8 539 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 ERVK-5Q9HDB9 667 aa16.08■□□□□ 0.16
SNF8-212ENST00000514089 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 POLR2DO15514 142 aaKnown RBP16.07■□□□□ 0.16
SNF8-212ENST00000514089 TLL1O43897 1013 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 TBCAO75347 108 aaKnown RBP16.07■□□□□ 0.16
SNF8-212ENST00000514089 FAM13AO94988 1023 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 PEX3P56589 373 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 PTENP60484 403 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 AMPD3Q01432 767 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 CAPSQ13938 189 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 ADALQ6DHV7 355 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 KMT5AQ9NQR1 393 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 C1orf112Q9NSG2 853 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 DACT1Q9NYF0 836 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 PIN4Q9Y237 131 aaKnown RBP16.07■□□□□ 0.16
SNF8-212ENST00000514089 PCDHB7Q9Y5E2 793 aa16.07■□□□□ 0.16
SNF8-212ENST00000514089 NPHP3-ACAD11A0A0J9YXS1 232 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 GRXCR1A8MXD5 290 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 CMA1P23946 247 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 NAMPTP43490 491 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 SMAD3P84022 425 aaKnown RBP16.06■□□□□ 0.16
SNF8-212ENST00000514089 POU5F1BQ06416 359 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 RAB30Q15771 203 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 MAPK6Q16659 721 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 TCTN1Q2MV58 587 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 AXDND1Q5T1B0 1012 aaPredicted RBP16.06■□□□□ 0.16
SNF8-212ENST00000514089 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 TWF2Q6IBS0 349 aaKnown RBP16.06■□□□□ 0.16
SNF8-212ENST00000514089 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 CEP57L1Q8IYX8 460 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 MYCT1Q8N699 235 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 C17orf75Q9HAS0 396 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 CHST12Q9NRB3 414 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 BLOC1S4Q9NUP1 217 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 LARSQ9P2J5 1176 aaKnown RBP16.06■□□□□ 0.16
SNF8-212ENST00000514089 KCNH3Q9ULD8 1083 aa16.06■□□□□ 0.16
SNF8-212ENST00000514089 K7ERI5 159 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 EFNA5P52803 228 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 RABGGTBP53611 331 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 DEFB103AP81534 67 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
SNF8-212ENST00000514089 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNF8-212ENST00000514089 RESP18Q5W5W9 173 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 SLC24A5Q71RS6 500 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 DYMQ7RTS9 669 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 YME1L1Q96TA2 773 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms