RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 PLA2G4FQ68DD2 849 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 TRMT1LQ7Z2T5 733 aaKnown RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 LRRC71Q8N4P6 559 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 SNX29Q8TEQ0 813 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 TIFAQ96CG3 184 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 SCLT1Q96NL6 688 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 TIPINQ9BVW5 301 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 GCOM2Q9BZD3 368 aaPredicted RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 ADAMTS10Q9H324 1103 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 ERVK-5Q9HDB9 667 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 KCND2Q9NZV8 630 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 SUCLA2Q9P2R7 463 aaPredicted RBP9.11□□□□□ -0.95
NEDD4-210ENST00000513957 PADI3Q9ULW8 664 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 COL4A3BPQ9Y5P4 624 aa9.11□□□□□ -0.95
NEDD4-210ENST00000513957 CDH23Q9H251 3354 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 PHLPP2Q6ZVD8 1323 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 TCHHQ07283 1943 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 ARHGEF35A5YM69 484 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 TLL1O43897 1013 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 VTNP04004 478 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 STAG3L1P0CL83 205 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 CD52P31358 61 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 NPEPPSP55786 919 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 HTRA4P83105 476 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-210ENST00000513957 TMEM62Q0P6H9 643 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 SF3A1Q15459 793 aaKnown RBP9.1□□□□□ -0.95
NEDD4-210ENST00000513957 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-210ENST00000513957 PPP2R2DQ66LE6 453 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 FERMT3Q86UX7 667 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 FAM228AQ86W67 206 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 NLRP7Q8WX94 980 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 DDX12PQ92771 950 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 TOP1MTQ969P6 601 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 ZBTB10Q96DT7 871 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 ZNF396Q96N95 335 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-210ENST00000513957 RAD9AQ99638 391 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 OSMRQ99650 979 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 AGO3Q9H9G7 860 aaKnown RBP9.1□□□□□ -0.95
NEDD4-210ENST00000513957 SLC28A3Q9HAS3 691 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 CHST12Q9NRB3 414 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 DACT1Q9NYF0 836 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 KCNG1Q9UIX4 513 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 DNM3Q9UQ16 869 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 GINS2Q9Y248 185 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 COL4A4P53420 1690 aaPredicted RBP9.1□□□□□ -0.95
NEDD4-210ENST00000513957 KIAA1671Q9BY89 1806 aa9.1□□□□□ -0.95
NEDD4-210ENST00000513957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 TMEM150BA6NC51 233 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 VWA3AA6NCI4 1184 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 HOXA2O43364 376 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 YEATS4O95619 227 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 EYA4O95677 639 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 F13A1P00488 732 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 ZSCAN22P10073 491 aaPredicted RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 SKIP12755 728 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 AXLP30530 894 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 TXLNAP40222 546 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 UBA7P41226 1012 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 PHKA2P46019 1235 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 NASPP49321 788 aaPredicted RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 DEFB103AP81534 67 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 SLC39A14Q15043 492 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 PPP2R5AQ15172 486 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 PTPAQ15257 358 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 IL17AQ16552 155 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 SLC24A5Q71RS6 500 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 RHPN2Q8IUC4 686 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 NPAS4Q8IUM7 802 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 MYOCDQ8IZQ8 938 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 PIGOQ8TEQ8 1089 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 TMEM40Q8WWA1 233 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 KIFAP3Q92845 792 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 CALML4Q96GE6 196 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 CDK5RAP3Q96JB5 506 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 NLRP4Q96MN2 994 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 SAMD11Q96NU1 681 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 ELAC1Q9H777 363 aaKnown RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 C17orf75Q9HAS0 396 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 XPNPEP1Q9NQW7 623 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 RGS18Q9NS28 235 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 DDX19AQ9NUU7 478 aaKnown RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 ST3GAL5Q9UNP4 418 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 KIAA1024Q9UPX6 916 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 NOC2LQ9Y3T9 749 aaKnown RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 RWDD3Q9Y3V2 267 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 ATP6V1DQ9Y5K8 247 aa9.09□□□□□ -0.95
NEDD4-210ENST00000513957 SRPRBQ9Y5M8 271 aaKnown RBP9.09□□□□□ -0.95
NEDD4-210ENST00000513957 DENND3A2RUS2 1198 aa9.08□□□□□ -0.96
NEDD4-210ENST00000513957 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
NEDD4-210ENST00000513957 ENPP3O14638 875 aa9.08□□□□□ -0.96
NEDD4-210ENST00000513957 USO1O60763 962 aaKnown RBP9.08□□□□□ -0.96
NEDD4-210ENST00000513957 PPP6R2O75170 966 aa9.08□□□□□ -0.96
NEDD4-210ENST00000513957 ZSCAN20P17040 1043 aaPredicted RBP9.08□□□□□ -0.96
NEDD4-210ENST00000513957 CYP11B2P19099 503 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms