RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ARHGAP44Q17R89 818 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 FIGNQ5HY92 759 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 FNIP1Q8TF40 1166 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 DACT3Q96B18 629 aaPredicted RBP5.69□□□□□ -1.5
CLDND1-228ENST00000513873 WNK4Q96J92 1243 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 CLUHP3Q96NS8 147 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 C11orf84Q9BUA3 381 aaPredicted RBP5.69□□□□□ -1.5
CLDND1-228ENST00000513873 CD244Q9BZW8 370 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 NTMQ9P121 344 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 SAMD15Q9P1V8 674 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 CBLCQ9ULV8 474 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 SRPK3Q9UPE1 567 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 TNPO3Q9Y5L0 923 aaKnown RBP5.69□□□□□ -1.5
CLDND1-228ENST00000513873 COL14A1Q05707 1796 aaKnown RBP5.69□□□□□ -1.5
CLDND1-228ENST00000513873 KIF1AQ12756 1690 aa5.69□□□□□ -1.5
CLDND1-228ENST00000513873 AATKQ6ZMQ8 1374 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 CDC42BPGQ6DT37 1551 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 ANKARQ7Z5J8 1434 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 SLC12A8A0AV02 714 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 FYB1O15117 783 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 LRG1P02750 347 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 LTFP02788 710 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 ENO2P09104 434 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-228ENST00000513873 MTHFSP49914 203 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 EPHA5P54756 1037 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 JAM2P57087 298 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 CAP1Q01518 475 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 CR1LQ2VPA4 569 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 CFAP100Q494V2 611 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 TMEM177Q53S58 311 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 ZCCHC8Q6NZY4 707 aaKnown RBP5.68□□□□□ -1.5
CLDND1-228ENST00000513873 KRT28Q7Z3Y7 464 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 MARCH10Q8NA82 808 aaPredicted RBP5.68□□□□□ -1.5
CLDND1-228ENST00000513873 WDR48Q8TAF3 677 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 GORASP1Q9BQQ3 440 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 INTS7Q9NVH2 962 aaKnown RBP5.68□□□□□ -1.5
CLDND1-228ENST00000513873 ARHGAP28Q9P2N2 729 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 PLAAQ9Y263 795 aa5.68□□□□□ -1.5
CLDND1-228ENST00000513873 A0A1W2PP64 1363 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 SBF2Q86WG5 1849 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 ENPP3O14638 875 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 CLASP2O75122 1294 aaKnown RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 FBXO21O94952 628 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 CKMP06732 381 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 JMJD7P0C870 316 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 PTPN1P18031 435 aaKnown RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 TNNT2P45379 298 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 SARSP49591 514 aaKnown RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 CALD1Q05682 793 aaKnown RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 VMACQ2NL98 169 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 CCDC184Q52MB2 194 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 PRAMEF18Q5VWM3 479 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 TMC5Q6UXY8 1006 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 STK32CQ86UX6 486 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 NIM1KQ8IY84 436 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 AHI1Q8N157 1196 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 NINJ1Q92982 152 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 RUNDC1Q96C34 613 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 NOX5Q96PH1 765 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 MTFR1LQ9H019 292 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
CLDND1-228ENST00000513873 HSPBP1Q9NZL4 362 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 ZKSCAN5Q9Y2L8 839 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 TULP4Q9NRJ4 1543 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 MAPK8IP3Q9UPT6 1336 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 PLEKHH1Q9ULM0 1364 aa5.67□□□□□ -1.5
CLDND1-228ENST00000513873 TNS3Q68CZ2 1445 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 QRICH2Q9H0J4 1663 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 TCRBV5S4A2TA0A5A2 114 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 PRAMEF25A6NGN4 478 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 ZNF561-AS1K7EIQ3 104 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 M0R2C6 588 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 MAN2B1O00754 1011 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 SCDO00767 359 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 DNAJC8O75937 253 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 AMY2AP04746 511 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 U2AF1L5P0DN76 240 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 AMY2BP19961 511 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 HSD3B2P26439 372 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 ITGA1P56199 1179 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 U2AF1Q01081 240 aaKnown RBP eCLIP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 SART3Q15020 963 aaKnown RBP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 SDE2Q6IQ49 451 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 PKN3Q6P5Z2 889 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 GIMAP6Q6P9H5 292 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 SAPCD2Q86UD0 394 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 SP8Q8IXZ3 490 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 DHX37Q8IY37 1157 aaKnown RBP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
CLDND1-228ENST00000513873 PDGFDQ9GZP0 370 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-228ENST00000513873 DLL4Q9NR61 685 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms