RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ARHGEF2	Q92974	986 aa	Known RBP	11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	IFT43	Q96FT9	208 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	ZNF333	Q96JL9	665 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	YIPF2	Q9BWQ6	316 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	CARD9	Q9H257	536 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	CCDC134	Q9H6E4	229 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	CTTNBP2NL	Q9P2B4	639 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	OAT	P04181	439 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	NUDT17	P0C025	328 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	SKI	P12755	728 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	STX2	P32856	288 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	RFC4	P35249	363 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	AUH	Q13825	339 aa	Known RBP	11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	SETDB1	Q15047	1291 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	CNPY1	Q3B7I2	92 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	SNX30	Q5VWJ9	437 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	USP17L2	Q6R6M4	530 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	LRP10	Q7Z4F1	713 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	PNMA1	Q8ND90	353 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	FAM163A	Q96GL9	167 aa	Predicted RBP	11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	DYDC2	Q96IM9	177 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	CUEDC2	Q9H467	287 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	LRCH1	Q9Y2L9	728 aa		11.99	□□□□□ -0.49
PDCD6-210	ENST00000513582	PRPF3	O43395	683 aa	Known RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	KHDC1	Q4VXA5	237 aa	Known RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	VCX3B	Q9H321	246 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	VCX3A	Q9NNX9	186 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	CTNNAL1	Q9UBT7	734 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582		E7ENQ6	273 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582		O00370	1275 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	ACSL3	O95573	720 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	BPIFB4	P59827	614 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	RCN1	Q15293	331 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	ASIC2	Q16515	512 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	ANKRD23	Q86SG2	305 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	COL23A1	Q86Y22	540 aa	Predicted RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	LRRC47	Q8N1G4	583 aa	Known RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	MARCH10	Q8NA82	808 aa	Predicted RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	TXLNGY	Q9BZA5	131 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	TBK1	Q9UHD2	729 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	MROH5	Q6ZUA9	1318 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	GNA14	O95837	355 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	GNAT2	P19087	354 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	INHBC	P55103	352 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	CERKL	Q49MI3	558 aa	Predicted RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	CGB2	Q6NT52	195 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	RFWD3	Q6PCD5	774 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	LCA5	Q86VQ0	697 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	SPIRE2	Q8WWL2	714 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	ABTB1	Q969K4	478 aa	Predicted RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	ERP44	Q9BS26	406 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	CHMP2B	Q9UQN3	213 aa		11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	AFDN	P55196	1824 aa	Known RBP	11.98	□□□□□ -0.49
PDCD6-210	ENST00000513582	DISP2	A7MBM2	1401 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	RPTOR	Q8N122	1335 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	NOL4	O94818	638 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	TJP3	O95049	919 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	BAG3	O95817	575 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	GSTA2	P09210	222 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	SCG2	P13521	617 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	DES	P17661	470 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	VHL	P40337	213 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PTK2	Q05397	1052 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PABPC1L	Q4VXU2	614 aa	Known RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	GLIS3	Q8NEA6	775 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	CRAMP1	Q96RY5	1269 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PITPNM3	Q9BZ71	974 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	ERVK-5	Q9HDB9	667 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	ZDHHC18	Q9NUE0	388 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	ETNK2	Q9NVF9	386 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	CEP72	Q9P209	647 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	STOML1	Q9UBI4	398 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	ANAPC4	Q9UJX5	808 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	SUGT1	Q9Y2Z0	365 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	KLRC3	Q07444	240 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	RFX8	Q6ZV50	586 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	C3orf67	Q6ZVT6	689 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	ZNF365	Q70YC5	407 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PTF1A	Q7RTS3	328 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	CABP7	Q86V35	215 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	MIPOL1	Q8TD10	442 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	STMN4	Q9H169	189 aa	Predicted RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	DNAJC17	Q9NVM6	304 aa	Known RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	FAM205A	Q6ZU69	1335 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	LDHB	P07195	334 aa	Known RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PLCG2	P16885	1265 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PSMC4	P43686	418 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	RPS8	P62241	208 aa	Known RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	FUT2	Q10981	343 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	TCP10	Q12799	353 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	OLFML2B	Q68BL8	750 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	CNNM4	Q6P4Q7	775 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	AGGF1	Q8N302	714 aa	eCLIP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	C4orf32	Q8N8J7	132 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PTPRN2	Q92932	1015 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	LRRC37B	Q96QE4	947 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	NAP1L3	Q99457	506 aa	Predicted RBP	11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms