RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 SORCS3Q9UPU3 1222 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 NR2E1Q9Y466 385 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 FAM186AA6NE01 2351 aa10.9□□□□□ -0.66
TCOF1-212ENST00000513538 NID2Q14112 1375 aa10.9□□□□□ -0.67
TCOF1-212ENST00000513538 WDR64B1ANS9 1081 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 CHMP2AO43633 222 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 KRT17Q04695 432 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 ITIH3Q06033 890 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 MTMR3Q13615 1198 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 LONRF3Q496Y0 759 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
TCOF1-212ENST00000513538 UBALD2Q8IYN6 164 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 VPS52Q8N1B4 723 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 SLC22A17Q8WUG5 538 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 SLC5A5Q92911 643 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 PHKBQ93100 1093 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 NECTIN4Q96NY8 510 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 SH2D3AQ9BRG2 576 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 UNC45AQ9H3U1 944 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 NAP1L2Q9ULW6 460 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-212ENST00000513538 SAMM50Q9Y512 469 aa10.89□□□□□ -0.67
TCOF1-212ENST00000513538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-212ENST00000513538 PROB1E7EW31 1015 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
TCOF1-212ENST00000513538 ZC3H11AO75152 810 aaKnown RBP eCLIP10.88□□□□□ -0.67
TCOF1-212ENST00000513538 CXCL14O95715 111 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 EOMESO95936 686 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 TMOD1P28289 359 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 CA8P35219 290 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 MTHFRP42898 656 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 PHKA2P46019 1235 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 NTRK3Q16288 839 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 RIF1Q5UIP0 2472 aaKnown RBP10.88□□□□□ -0.67
TCOF1-212ENST00000513538 KIAA1841Q6NSI8 718 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 CES5AQ6NT32 575 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 Q6ZUG5 572 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 TDRD5Q8NAT2 981 aaKnown RBP10.88□□□□□ -0.67
TCOF1-212ENST00000513538 TMEM169Q96HH4 297 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 SCLT1Q96NL6 688 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 MRPL9Q9BYD2 267 aaKnown RBP10.88□□□□□ -0.67
TCOF1-212ENST00000513538 NRDE2Q9H7Z3 1164 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 C6orf50Q9HD87 102 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 TBC1D13Q9NVG8 400 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 DNAJB4Q9UDY4 337 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 LIMD1Q9UGP4 676 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 TCEAL9Q9UHQ7 104 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 DOCK8Q8NF50 2099 aa10.88□□□□□ -0.67
TCOF1-212ENST00000513538 ARID2Q68CP9 1835 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 A0A087WZ62 844 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 IGKV6-21A0A0C4DH24 114 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 PRR23AA6NEV1 266 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 CTSAP10619 480 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 NBL1P41271 181 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 NUBP1P53384 320 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 TBC1D8BQ0IIM8 1120 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 MTERF2Q49AM1 385 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 BMP2KLQ5H9B9 411 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 DDX53Q86TM3 631 aaKnown RBP10.87□□□□□ -0.67
TCOF1-212ENST00000513538 KSR1Q8IVT5 923 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 ZDHHC14Q8IZN3 488 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 NLRP7Q8WX94 980 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 BRF1Q92994 677 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 RIT2Q99578 217 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 FDXACB1Q9BRP7 624 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-212ENST00000513538 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 NRBP2Q9NSY0 501 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 DACT1Q9NYF0 836 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 VPS54Q9P1Q0 977 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-212ENST00000513538 IRAK3Q9Y616 596 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 SPTBN4Q9H254 2564 aa10.87□□□□□ -0.67
TCOF1-212ENST00000513538 GAS7O60861 476 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 PSMD10O75832 226 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 TDP2O95551 362 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 GALTP07902 379 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 SLC11A1P49279 550 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
TCOF1-212ENST00000513538 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
TCOF1-212ENST00000513538 JAK3P52333 1124 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 LRCH2Q5VUJ6 765 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 MCTP2Q6DN12 878 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-212ENST00000513538 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
TCOF1-212ENST00000513538 TMC5Q6UXY8 1006 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 ZNF280BQ86YH2 543 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 CCDC12Q8WUD4 166 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-212ENST00000513538 KCNB2Q92953 911 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 CCDC136Q96JN2 1154 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 TEKT3Q9BXF9 490 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 NIFKQ9BYG3 293 aaKnown RBP10.86□□□□□ -0.67
TCOF1-212ENST00000513538 IRF2BPLQ9H1B7 796 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 FAM105AQ9NUU6 356 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
TCOF1-212ENST00000513538 DBR1Q9UK59 544 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms