RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.47□□□□□ -0.25
CDK7-208ENST00000512687 SPPL3Q8TCT6 385 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 LMAN2LQ9H0V9 348 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 TMEM60Q9H2L4 133 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 CWH43Q9H720 699 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 ELAC1Q9H777 363 aaKnown RBP13.47□□□□□ -0.25
CDK7-208ENST00000512687 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
CDK7-208ENST00000512687 TMEM161AQ9NX61 479 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
CDK7-208ENST00000512687 MYH11P35749 1972 aa13.47□□□□□ -0.25
CDK7-208ENST00000512687 HAX1O00165 279 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 MARCH6O60337 910 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 NEMFO60524 1076 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 IRS1P35568 1242 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 CLCN6P51797 869 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 HYAL1Q12794 435 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 TRIM29Q14134 588 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 CALCRLQ16602 461 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 LEXMQ3ZCV2 418 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 LRRC55Q6ZSA7 311 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 FAM43BQ6ZT52 329 aaPredicted RBP13.46□□□□□ -0.25
CDK7-208ENST00000512687 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 ECHDC2Q86YB7 292 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 C4orf19Q8IY42 314 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 MTMR9Q96QG7 549 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 EIF2AK1Q9BQI3 630 aaKnown RBP13.46□□□□□ -0.25
CDK7-208ENST00000512687 DHX33Q9H6R0 707 aaKnown RBP13.46□□□□□ -0.25
CDK7-208ENST00000512687 ATP6V0A4Q9HBG4 840 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 TYW1Q9NV66 732 aaKnown RBP13.46□□□□□ -0.25
CDK7-208ENST00000512687 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
CDK7-208ENST00000512687 TRIP11Q15643 1979 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 LINC01565O15544 149 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 SLITRK3O94933 977 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 BAG4O95429 457 aaKnown RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 YWHABP31946 246 aaKnown RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 LTBRP36941 435 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 RBM25P49756 843 aaKnown RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 ZNF598Q86UK7 904 aaKnown RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 ZNF410Q86VK4 478 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 NEK9Q8TD19 979 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 TMEM143Q96AN5 459 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 PABPC5Q96DU9 382 aaKnown RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 CEP170P1Q96L14 293 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 NLRP4Q96MN2 994 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 GCOM2Q9BZD3 368 aaPredicted RBP13.45□□□□□ -0.26
CDK7-208ENST00000512687 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
CDK7-208ENST00000512687 POTEMA6NI47 508 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDK7-208ENST00000512687 IL9P15248 144 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 ZSCAN20P17040 1043 aaPredicted RBP13.44□□□□□ -0.26
CDK7-208ENST00000512687 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 TXKP42681 527 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 DNM2P50570 870 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
CDK7-208ENST00000512687 DLX2Q07687 328 aaPredicted RBP13.44□□□□□ -0.26
CDK7-208ENST00000512687 EMC2Q15006 297 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 CTC1Q2NKJ3 1217 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 NAALADL2Q58DX5 795 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
CDK7-208ENST00000512687 TPH2Q8IWU9 490 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 RNF169Q8NCN4 708 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 TMEM117Q9H0C3 514 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 ZSWIM4Q9H7M6 989 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
CDK7-208ENST00000512687 MINDY3Q9H8M7 445 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 XPNPEP1Q9NQW7 623 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 CLDND1Q9NY35 253 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 PCDHA12Q9UN75 941 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
CDK7-208ENST00000512687 A0A087WWV3 80 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 A0A0U1RQF3 1178 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 MEIS3P2A8K0S8 358 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 TBX10O75333 385 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 CD2BP2O95400 341 aaKnown RBP13.43□□□□□ -0.26
CDK7-208ENST00000512687 MCM7P33993 719 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 PBX3P40426 434 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 RFC5P40937 340 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 XKR9Q5GH70 373 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 HELQQ8TDG4 1101 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 PRPF31Q8WWY3 499 aaKnown RBP13.43□□□□□ -0.26
CDK7-208ENST00000512687 SLC7A3Q8WY07 619 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.262e-7■■□□□ 11.8
CDK7-208ENST00000512687 ZSCAN31Q96LW9 406 aaPredicted RBP13.43□□□□□ -0.26
CDK7-208ENST00000512687 HSD17B14Q9BPX1 270 aa13.43□□□□□ -0.26
CDK7-208ENST00000512687 JPH2Q9BR39 696 aaPredicted RBP13.43□□□□□ -0.26
CDK7-208ENST00000512687 SH2B1Q9NRF2 756 aaPredicted RBP13.43□□□□□ -0.26
CDK7-208ENST00000512687 PIN4Q9Y237 131 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms