RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 IRAK3Q9Y616 596 aa14.15□□□□□ -0.14
VEGFA-216ENST00000512683 EVPLQ92817 2033 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 EDIL3O43854 480 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 SFPQP23246 707 aaKnown RBP eCLIP14.14□□□□□ -0.15
VEGFA-216ENST00000512683 PTPN21Q16825 1174 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 PLPP4Q5VZY2 271 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 SYCE2Q6PIF2 218 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 TRMT1LQ7Z2T5 733 aaKnown RBP14.14□□□□□ -0.15
VEGFA-216ENST00000512683 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 LRRC71Q8N4P6 559 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 DAGLBQ8NCG7 672 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 VN1R2Q8NFZ6 395 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 ZNF274Q96GC6 653 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-216ENST00000512683 MBOAT7Q96N66 472 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 SCLT1Q96NL6 688 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 ADAM7Q9H2U9 754 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 NCOA5Q9HCD5 579 aaKnown RBP14.14□□□□□ -0.15
VEGFA-216ENST00000512683 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
VEGFA-216ENST00000512683 C2orf71A6NGG8 1288 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 DEXIO95424 95 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 MTHFRP42898 656 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 RAB27AP51159 221 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 SSRP1Q08945 709 aaKnown RBP14.13□□□□□ -0.15
VEGFA-216ENST00000512683 UBALD2Q8IYN6 164 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 TBCKQ8TEA7 893 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 TMEM169Q96HH4 297 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 RIPOR3Q96MK2 946 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 PPP1R16BQ96T49 567 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 DZANK1Q9NVP4 752 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 VPS54Q9P1Q0 977 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 PCDHGC5Q9Y5F6 944 aa14.13□□□□□ -0.15
VEGFA-216ENST00000512683 HIDE1A8MVS5 230 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 CPLX1O14810 134 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 MAFO75444 373 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 STBD1O95210 358 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 CXCL14O95715 111 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 PHKA2P46019 1235 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 PSMC5P62195 406 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 PCBP1Q15365 356 aaKnown RBP eCLIP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 CLLU1OSQ5K130 101 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 GLB1LQ6UWU2 654 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 DDX53Q86TM3 631 aaKnown RBP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 PPFIBP1Q86W92 1011 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 BLIDQ8IZY5 108 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 TMEM87AQ8NBN3 555 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 NAP1L4Q99733 375 aaKnown RBP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 SUCLA2Q9P2R7 463 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-216ENST00000512683 USTQ9Y2C2 406 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
VEGFA-216ENST00000512683 M0R2N6 131 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 ASAP2O43150 1006 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 CLASP2O75122 1294 aaKnown RBP14.11□□□□□ -0.15
VEGFA-216ENST00000512683 BCAR1P56945 870 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 ERICH6BQ5W0A0 696 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 RNF169Q8NCN4 708 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 ASIC4Q96FT7 647 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 KANSL3Q9P2N6 904 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 HCSTQ9UBK5 93 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 HCFC2Q9Y5Z7 792 aa14.11□□□□□ -0.15
VEGFA-216ENST00000512683 DDX11L8A8MPP1 907 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 TBX3O15119 743 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 CHMP2AO43633 222 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 GAS2O43903 313 aaKnown RBP14.1□□□□□ -0.15
VEGFA-216ENST00000512683 CTSAP10619 480 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 GCFC2P16383 781 aaKnown RBP14.1□□□□□ -0.15
VEGFA-216ENST00000512683 XBP1P17861 261 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 AVPR2P30518 371 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 QARSP47897 775 aaKnown RBP14.1□□□□□ -0.15
VEGFA-216ENST00000512683 RBM10P98175 930 aaKnown RBP14.1□□□□□ -0.15
VEGFA-216ENST00000512683 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.159e-8■■■■□ 26.1
VEGFA-216ENST00000512683 UGCGQ16739 394 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 NOMO2Q5JPE7 1267 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 TWF2Q6IBS0 349 aaKnown RBP14.1□□□□□ -0.15
VEGFA-216ENST00000512683 PPP4R3AQ6IN85 833 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 KRT25Q7Z3Z0 450 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 ZDHHC14Q8IZN3 488 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 ETNPPLQ8TBG4 499 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 UBN1Q9NPG3 1134 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-216ENST00000512683 SORCS3Q9UPU3 1222 aa14.1□□□□□ -0.15
VEGFA-216ENST00000512683 A0A087WZ62 844 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 OFD1O75665 1012 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 CDKL5O76039 1030 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 C1RP00736 705 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 ALDH2P05091 517 aa14.09□□□□□ -0.15
VEGFA-216ENST00000512683 P4HBP07237 508 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms