RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CYTH3O43739 400 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 B4GALT3O60512 393 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 LILRB3O75022 631 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 GPR32O75388 356 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 CNPP09543 421 aaKnown RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 TDGF1P13385 188 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 CD72P21854 359 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 ALDH7A1P49419 539 aaKnown RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 POLGP54098 1239 aaPredicted RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 USP17L6PQ6QN14 398 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 ABI1Q8IZP0 508 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 CMASQ8NFW8 434 aaPredicted RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 SLC39A7Q92504 469 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 NXPE3Q969Y0 559 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 ZNF707Q96C28 371 aaPredicted RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 GPRASP2Q96D09 838 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 IGSF21Q96ID5 467 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 PRMT8Q9NR22 394 aaPredicted RBP10.46□□□□□ -0.74
NUP54-211ENST00000512151 MAN1C1Q9NR34 630 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 MYH15Q9Y2K3 1946 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 ASPMQ8IZT6 3477 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 TTC41PQ6P2S7 1318 aa10.46□□□□□ -0.74
NUP54-211ENST00000512151 GCN1Q92616 2671 aaKnown RBP10.45□□□□□ -0.74
NUP54-211ENST00000512151 CCDC195A0A1B0GUA6 201 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 ZBTB42B2RXF5 422 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 ZC3H11AO75152 810 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■■□ 20.6
NUP54-211ENST00000512151 RFPL2O75678 378 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
NUP54-211ENST00000512151 PCP11498 1178 aaKnown RBP10.45□□□□□ -0.74
NUP54-211ENST00000512151 LAMP2P13473 410 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 KLRC2P26717 231 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 CRYBB1P53674 252 aaPredicted RBP10.45□□□□□ -0.74
NUP54-211ENST00000512151 GIT2Q14161 759 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 BMS1Q14692 1282 aaKnown RBP10.45□□□□□ -0.74
NUP54-211ENST00000512151 UBXN2BQ14CS0 331 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 PRR23CQ6ZRP0 262 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 FAM43BQ6ZT52 329 aaPredicted RBP10.45□□□□□ -0.74
NUP54-211ENST00000512151 PPFIBP1Q86W92 1011 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 RIOX1Q9H6W3 641 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 HELLSQ9NRZ9 838 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 SEMA4GQ9NTN9 838 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 ZSWIM5Q9P217 1185 aa10.45□□□□□ -0.74
NUP54-211ENST00000512151 MEIS2O14770 477 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 TM4SF5O14894 197 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 INPPL1O15357 1258 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 VTNP04004 478 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 GALTP07902 379 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 FZD5Q13467 585 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 MLF2Q15773 248 aaPredicted RBP10.44□□□□□ -0.74
NUP54-211ENST00000512151 ODR4Q5SWX8 454 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 LAIR1Q6GTX8 287 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 PLPPR4Q7Z2D5 763 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 IQCA1Q86XH1 822 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 MAP4K1Q92918 833 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 SHDQ96IW2 340 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 RNF41Q9H4P4 317 aaPredicted RBP10.44□□□□□ -0.74
NUP54-211ENST00000512151 DCTPP1Q9H773 170 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 NRDE2Q9H7Z3 1164 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 LTB4R2Q9NPC1 389 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 UBIAD1Q9Y5Z9 338 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 RALGAPA1Q6GYQ0 2036 aa10.44□□□□□ -0.74
NUP54-211ENST00000512151 PNMA6FA0A0J9YX94 578 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 SHISA7A6NL88 538 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 RETP07949 1114 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 TARSP26639 723 aaKnown RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 SLC11A1P49279 550 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 STAT5BP51692 787 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 ACTR2P61160 394 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 CSRP2Q16527 193 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 SLC44A4Q53GD3 710 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 CCDC178Q5BJE1 867 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 LRSAM1Q6UWE0 723 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 PARM1Q6UWI2 310 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 UNQ6494/PRO21346Q6UXR6 183 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 GET4Q7L5D6 327 aaPredicted RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 KDF1Q8NAX2 398 aaPredicted RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 SMG7Q92540 1137 aaKnown RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 STAMQ92783 540 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 FGF14Q92915 247 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 CLDN23Q96B33 292 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 ZNF668Q96K58 619 aaPredicted RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 RHOBTB2Q9BYZ6 727 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 OSBPL6Q9BZF3 934 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 AZI2Q9H6S1 392 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 JPH1Q9HDC5 661 aaPredicted RBP10.43□□□□□ -0.74
NUP54-211ENST00000512151 SLC9A2Q9UBY0 812 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 DNAJB4Q9UDY4 337 aa10.43□□□□□ -0.74
NUP54-211ENST00000512151 MEIS3P2A8K0S8 358 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 LRP3O75074 770 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 C22orf31O95567 290 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 NEFLP07196 543 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 SPATA31D3P0C874 917 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 FGFR4P22455 802 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 RING1Q06587 406 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 MTAPQ13126 283 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms