RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 SPC25Q9HBM1 224 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 HMX1Q9NP08 348 aaPredicted RBP11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 TRAF3IP3Q9Y228 551 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 ADGRA3Q8IWK6 1321 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 NRCAMQ92823 1304 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
PDGFRA-209ENST00000512143 GOLGA6L19H0YKK7 550 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 PDXKO00764 312 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 SLC16A4O15374 487 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 ZEB2O60315 1214 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 GCNT3O95395 438 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 SMIM10L2AP0DMW4 78 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 SMIM10L2BP0DMW5 78 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 SCP2P22307 547 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 NAMPTP43490 491 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 DMP1Q13316 513 aaPredicted RBP11□□□□□ -0.65
PDGFRA-209ENST00000512143 NFIL3Q16649 462 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 EFCAB12Q6NXP0 572 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 LRRC55Q6ZSA7 311 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 STXBP4Q6ZWJ1 553 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 TAS1R3Q7RTX0 852 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 APTXQ7Z2E3 356 aaKnown RBP11□□□□□ -0.65
PDGFRA-209ENST00000512143 HAUS6Q7Z4H7 955 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 LRRC71Q8N4P6 559 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 TCP11Q8WWU5 503 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 HVCN1Q96D96 273 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 ZBTB10Q96DT7 871 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 SAMSN1Q9NSI8 373 aaKnown RBP11□□□□□ -0.65
PDGFRA-209ENST00000512143 BRCA2P51587 3418 aa11□□□□□ -0.65
PDGFRA-209ENST00000512143 LRRC10BA6NIK2 292 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 CCDC169A6NNP5 214 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 K7ENM7 598 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 ASAP2O43150 1006 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 ASGR1P07306 291 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 ATP1A3P13637 1013 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SMTNP53814 917 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 POU5F1BQ06416 359 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 LAMTOR4Q0VGL1 99 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 CAPSQ13938 189 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 MXD4Q14582 209 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 PPP2R5AQ15172 486 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 KCNA10Q16322 511 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 EDRF1Q3B7T1 1238 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 CDCA2Q69YH5 1023 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 CXCL17Q6UXB2 119 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SESTD1Q86VW0 696 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 KSR1Q8IVT5 923 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 NELFCDQ8IXH7 590 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 KIAA0319LQ8IZA0 1049 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 PCSK9Q8NBP7 692 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SH3TC2Q8TF17 1288 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 NOC3LQ8WTT2 800 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 PSPC1Q8WXF1 523 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 IFT74Q96LB3 600 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 KIFC3Q9BVG8 833 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 IKZF4Q9H2S9 585 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 THAP9Q9H5L6 903 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SUGCTQ9HAC7 445 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 KMT5AQ9NQR1 393 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 PAK6Q9NQU5 681 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 TYW1Q9NV66 732 aaKnown RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SETD4Q9NVD3 440 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 TBX20Q9UMR3 447 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 FRMPD3Q5JV73 1810 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 GRIN2DO15399 1336 aa10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
PDGFRA-209ENST00000512143 SIP14410 1827 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 DENND3A2RUS2 1198 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 H0YCG3 227 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 ABCD1P33897 745 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 DNM2P50570 870 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 CLCN3P51790 818 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 SNRPFP62306 86 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 IGBP1P78318 339 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 MYBPC2Q14324 1141 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 NFRKBQ6P4R8 1299 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 CTU1Q7Z7A3 348 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 RNF180Q86T96 592 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 MAP4K3Q8IVH8 894 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 C12orf56Q8IXR9 622 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 CSGALNACT2Q8N6G5 542 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 ACCSQ96QU6 501 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 SRRTQ9BXP5 876 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 NFKBIZQ9BYH8 718 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 CCDC113Q9H0I3 377 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 UNC93B1Q9H1C4 597 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 TMEM134Q9H6X4 195 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 DMAC2Q9NW81 257 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 HDAC6Q9UBN7 1215 aa10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 LIMA1Q9UHB6 759 aaKnown RBP10.98□□□□□ -0.65
PDGFRA-209ENST00000512143 DNAH12Q6ZR08 3092 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms