RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NXPE1Q8N323 547 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 PPM1KQ8N3J5 372 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 STAG1Q8WVM7 1258 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 FERMT2Q96AC1 680 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 SLC7A6OSQ96CW6 309 aaPredicted RBP4.45□□□□□ -1.7
CHD1-207ENST00000511628 RPL10LQ96L21 214 aaKnown RBP4.45□□□□□ -1.7
CHD1-207ENST00000511628 WDR92Q96MX6 357 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 MSL2Q9HCI7 577 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 POLR3BQ9NW08 1133 aaPredicted RBP4.45□□□□□ -1.7
CHD1-207ENST00000511628 TESMINQ9Y4I5 508 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 SPO11Q9Y5K1 396 aa4.45□□□□□ -1.7
CHD1-207ENST00000511628 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 ATP2A2P16615 1042 aaKnown RBP4.44□□□□□ -1.7
CHD1-207ENST00000511628 TNFRSF1AP19438 455 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 CRHR2Q13324 411 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 TCIRG1Q13488 830 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 KIF18BQ86Y91 864 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 ANKRD53Q8N9V6 530 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 OR2W6PQ8NHA6 318 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 ZCRB1Q8TBF4 217 aaKnown RBP4.44□□□□□ -1.7
CHD1-207ENST00000511628 CHAC2Q8WUX2 184 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 RTF1Q92541 710 aaKnown RBP4.44□□□□□ -1.7
CHD1-207ENST00000511628 ARL8AQ96BM9 186 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 WWC2-AS2Q96NR7 200 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 GPR101Q96P66 508 aaPredicted RBP4.44□□□□□ -1.7
CHD1-207ENST00000511628 MYL10Q9BUA6 226 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 SLC6A15Q9H2J7 730 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 CAAP1Q9H8G2 361 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 PLA2G3Q9NZ20 509 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 DNAI1Q9UI46 699 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 KCNG1Q9UIX4 513 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 SLC30A1Q9Y6M5 507 aa4.44□□□□□ -1.7
CHD1-207ENST00000511628 CYP27B1O15528 508 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 FZD7O75084 574 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 MAFO75444 373 aaPredicted RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 PRPF6O94906 941 aaKnown RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 F2P00734 622 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 POU3F2P20265 443 aaPredicted RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 TACR2P21452 398 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 IBSPP21815 317 aaPredicted RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 CNGA1P29973 690 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 RIN1Q13671 783 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 CDSNQ15517 529 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 MAN2A1Q16706 1144 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 USP39Q53GS9 565 aaKnown RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 LHFPL2Q6ZUX7 228 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 ESPNLQ6ZVH7 1005 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 BMP8AQ7Z5Y6 402 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 ADGRE4PQ86SQ3 457 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 DDX42Q86XP3 938 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD1-207ENST00000511628 GSPT2Q8IYD1 628 aaKnown RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 THEMISQ8N1K5 641 aaPredicted RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 AFAP1L2Q8N4X5 818 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 EFHBQ8N7U6 833 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 CHTF18Q8WVB6 975 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 RABGGTAQ92696 567 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 EDAQ92838 391 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 HIST1H2AHQ96KK5 128 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 UIMC1Q96RL1 719 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 HIST1H2AJQ99878 128 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 NOL10Q9BSC4 688 aaKnown RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 EPC1Q9H2F5 836 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 MTG2Q9H4K7 406 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 TLR9Q9NR96 1032 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 H2AFY2Q9P0M6 372 aaPredicted RBP4.43□□□□□ -1.7
CHD1-207ENST00000511628 MAPRE3Q9UPY8 281 aa4.43□□□□□ -1.7
CHD1-207ENST00000511628 ZNF891A8MT65 544 aaPredicted RBP4.42□□□□□ -1.7
CHD1-207ENST00000511628 MATN2O00339 956 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 PCDH8O95206 1070 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 EYA4O95677 639 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 XPAP23025 273 aaPredicted RBP4.42□□□□□ -1.7
CHD1-207ENST00000511628 ANAPC15P60006 121 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 FOXL1Q12952 345 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 KIAA1841Q6NSI8 718 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 C1orf210Q8IVY1 113 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 ANKRD35Q8N283 1001 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 ZNF808Q8N4W9 903 aaPredicted RBP4.42□□□□□ -1.7
CHD1-207ENST00000511628 PRPF38AQ8NAV1 312 aaKnown RBP4.42□□□□□ -1.7
CHD1-207ENST00000511628 PLA2G15Q8NCC3 412 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 LEO1Q8WVC0 666 aaPredicted RBP4.42□□□□□ -1.7
CHD1-207ENST00000511628 CFHR4Q92496 578 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 TCF25Q9BQ70 676 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 ATP8A1Q9Y2Q0 1164 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 GIT1Q9Y2X7 761 aa4.42□□□□□ -1.7
CHD1-207ENST00000511628 CTDP1Q9Y5B0 961 aaPredicted RBP4.42□□□□□ -1.7
CHD1-207ENST00000511628 FSBPO95073 299 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 CDK11BP21127 795 aaKnown RBP4.41□□□□□ -1.7
CHD1-207ENST00000511628 LSP1P33241 339 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 SOX5P35711 763 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 NPEPPSP55786 919 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 ANTXR2P58335 489 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 HGFACQ04756 655 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 CNGB1Q14028 1251 aaPredicted RBP4.41□□□□□ -1.7
CHD1-207ENST00000511628 MYBPC3Q14896 1274 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 ACAP1Q15027 740 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 ESRP1Q6NXG1 681 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms