RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 INO80BQ9C086 356 aaPredicted RBP12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 ATP6V0A4Q9HBG4 840 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 CHST12Q9NRB3 414 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 RWDD3Q9Y3V2 267 aa12.95□□□□□ -0.34
SH3RF1-205ENST00000511421 A0A0U1RQF3 1178 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 ASAP2O43150 1006 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 SRGAP2CP0DJJ0 459 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 SFPQP23246 707 aaKnown RBP eCLIP12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 PDIA5Q14554 519 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 IL17AQ16552 155 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 ECM1Q16610 540 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 ZNF598Q86UK7 904 aaKnown RBP12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 ECHDC2Q86YB7 292 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 IGSF22Q8N9C0 903 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 ERMNQ8TAM6 284 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 TRAIPQ9BWF2 469 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 MINDY3Q9H8M7 445 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 DBR1Q9UK59 544 aaKnown RBP12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 MYO7AQ13402 2215 aa12.94□□□□□ -0.34
SH3RF1-205ENST00000511421 TBKBP1A7MCY6 615 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 LAD1O00515 517 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 FGFR1P11362 822 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 ATF7P17544 494 aaPredicted RBP12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 ARL2P36404 184 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 RNF149Q8NC42 400 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 ASAP3Q8TDY4 903 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 MRPL38Q96DV4 380 aaKnown RBP12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 NACC1Q96RE7 527 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 DACT1Q9NYF0 836 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 LRWD1Q9UFC0 647 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 REV3LO60673 3130 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 GRM6O15303 877 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 MUTP22033 750 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 PRPHP41219 470 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 MXD4Q14582 209 aaPredicted RBP12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 PTPROQ16827 1216 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 CATSPER4Q7RTX7 472 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 CASD1Q96PB1 797 aa12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 C11orf84Q9BUA3 381 aaPredicted RBP12.93□□□□□ -0.34
SH3RF1-205ENST00000511421 BRWD1Q9NSI6 2320 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 ARID2Q68CP9 1835 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 NLRC5Q86WI3 1866 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 USO1O60763 962 aaKnown RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 EOMESO95936 686 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 GLRA2P23416 452 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 HOXA11P31270 313 aaPredicted RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 PHKA2P46019 1235 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 PTENP60484 403 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 ATP2C1P98194 919 aaPredicted RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 SKIV2LQ15477 1246 aaKnown RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 CLLU1OSQ5K130 101 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 HAUS3Q68CZ6 603 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 P2RX5Q93086 422 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 TMEM117Q9H0C3 514 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 CWH43Q9H720 699 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 AGPAT5Q9NUQ2 364 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 HCSTQ9UBK5 93 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 PIN4Q9Y237 131 aaKnown RBP12.92□□□□□ -0.34
SH3RF1-205ENST00000511421 VCANP13611 3396 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 HOXA2O43364 376 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 ITGB1P05556 798 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 CCT6AP40227 531 aaKnown RBP12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 CAPSQ13938 189 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 CAMK1Q14012 370 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 LRRC55Q6ZSA7 311 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 SPPL3Q8TCT6 385 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 RAB34Q9BZG1 259 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 LMAN2LQ9H0V9 348 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 GPRC5CQ9NQ84 441 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 FNDC1Q4ZHG4 1894 aaPredicted RBP12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 TTC28Q96AY4 2481 aa12.91□□□□□ -0.34
SH3RF1-205ENST00000511421 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 ZNF623O75123 536 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 CYP11B2P19099 503 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 CDC25AP30304 524 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 TFF2Q03403 129 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 TFDP1Q14186 410 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 TIGD5Q53EQ6 642 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
SH3RF1-205ENST00000511421 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms