RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 NFATC3Q12968 1075 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 NOLC1Q14978 699 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 KRT72Q14CN4 511 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 BMP8AQ7Z5Y6 402 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 MORC1Q86VD1 984 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 GRAMD1CQ8IYS0 662 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 PPP1R14CQ8TAE6 165 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 RNF32Q9H0A6 362 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 KCMF1Q9P0J7 381 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 EVLQ9UI08 416 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 DBR1Q9UK59 544 aaKnown RBP6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 L1RE1Q9UN81 338 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 ANGEL1Q9UNK9 670 aaKnown RBP6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 LIMCH1Q9UPQ0 1083 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 ABLIM1O14639 778 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 NRP2O60462 931 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 UBXN7O94888 489 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 FBLN1P23142 703 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 PFKPQ01813 784 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 PPARAQ07869 468 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 SEMA5AQ13591 1074 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 GJC2Q5T442 439 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 KANK2Q63ZY3 851 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 KRT78Q8N1N4 520 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 DTX3Q8N9I9 347 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 ABHD4Q8TB40 342 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 OR10A5Q9H207 317 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 GREM2Q9H772 168 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 SLC39A2Q9NP94 309 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 FTSJ1Q9UET6 329 aa6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 CFAP20Q9Y6A4 193 aaKnown RBP6.88□□□□□ -1.31
HMGB1P47-201ENST00000511281 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 PCDH8O95206 1070 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 GALK1P51570 392 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 ALDH5A1P51649 535 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 AK2P54819 239 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 NKX3-2P78367 333 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 MGAT2Q10469 447 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 PLCL1Q15111 1095 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 MUM1L1Q5H9M0 696 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 KLHDC10Q6PID8 442 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 ZC3H14Q6PJT7 736 aaKnown RBP6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 CXXC5Q7LFL8 322 aaKnown RBP6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 FAM156AQ8NDB6 213 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 PPP1R35Q8TAP8 253 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 PTPN18Q99952 460 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 LRFN3Q9BTN0 628 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 FAM50BQ9Y247 325 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 HCFC2Q9Y5Z7 792 aa6.87□□□□□ -1.31
HMGB1P47-201ENST00000511281 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 SERPINB3P29508 390 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 AFMP43652 599 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 CACNB3P54284 484 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 CDK17Q00537 523 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 C10orf62Q5T681 223 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 VASNQ6EMK4 673 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 LRSAM1Q6UWE0 723 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 ZC3H18Q86VM9 953 aaKnown RBP6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 IRF2BP1Q8IU81 584 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 CAMKK1Q8N5S9 505 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 PPM1NQ8N819 430 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 NRG4Q8WWG1 115 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 SLC6A17Q9H1V8 727 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 NLRC4Q9NPP4 1024 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 DLL4Q9NR61 685 aa6.86□□□□□ -1.31
HMGB1P47-201ENST00000511281 KLRG2A4D1S0 409 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 GOLIM4O00461 696 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 SLC16A6O15403 523 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 ALDH2P05091 517 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 ITGB7P26010 798 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 MEF2AQ02078 507 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 DSC2Q02487 901 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 PPP3CAQ08209 521 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 ZNF792Q3KQV3 632 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 DARS2Q6PI48 645 aaKnown RBP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 GAREM2Q75VX8 874 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 GLB1L2Q8IW92 636 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 GLB1L3Q8NCI6 653 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 HDAC10Q969S8 669 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 HIST1H2AHQ96KK5 128 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 TMEM209Q96SK2 561 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 HIST1H2AJQ99878 128 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 FDXACB1Q9BRP7 624 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 B3GNT5Q9BYG0 378 aa6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB1P47-201ENST00000511281 IRS2Q9Y4H2 1338 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 A0A0A6YYK5 440 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 OR14I1A6ND48 311 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 FRS3O43559 492 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 WNT11O96014 354 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms