RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 A0A0A6YYJ9 748 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 VSIG10L2P0DP72 767 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 KIF18BQ86Y91 864 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 PHYKPLQ8IUZ5 450 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 C7orf31Q8N865 590 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 MIEF2Q96C03 454 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 RPL10LQ96L21 214 aaKnown RBP7.52□□□□□ -1.21
NUP54-209ENST00000510569 IL23AQ9NPF7 189 aa7.52□□□□□ -1.21
NUP54-209ENST00000510569 TOX4O94842 621 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 PEX11BO96011 259 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 TGFB2P61812 414 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 PURAQ00577 322 aaKnown RBP7.51□□□□□ -1.21
NUP54-209ENST00000510569 ADCY2Q08462 1091 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 FAM111BQ6SJ93 734 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 ZNF483Q8TF39 744 aaPredicted RBP7.51□□□□□ -1.21
NUP54-209ENST00000510569 TRIM8Q9BZR9 551 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 PARPBPQ9NWS1 579 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 OXSMQ9NWU1 459 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
NUP54-209ENST00000510569 MTSS1O43312 755 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 JUNP05412 331 aaKnown RBP7.5□□□□□ -1.21
NUP54-209ENST00000510569 ATP2A2P16615 1042 aaKnown RBP7.5□□□□□ -1.21
NUP54-209ENST00000510569 POU3F2P20265 443 aaPredicted RBP7.5□□□□□ -1.21
NUP54-209ENST00000510569 SCNN1GP51170 649 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 DPTQ07507 201 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 CRHR2Q13324 411 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 CCDC144BQ3MJ40 725 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 KIAA1841Q6NSI8 718 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 Q6ZRM9 215 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 ZZZ3Q8IYH5 903 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 UBXN4Q92575 508 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 TCF25Q9BQ70 676 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 OSBPL6Q9BZF3 934 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 MTG2Q9H4K7 406 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 ZMAT4Q9H898 229 aa7.5□□□□□ -1.21
NUP54-209ENST00000510569 C14orf93Q9H972 538 aaKnown RBP7.5□□□□□ -1.21
NUP54-209ENST00000510569 UBE2QL1A1L167 161 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 DSG1Q02413 1049 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 TCEA2Q15560 299 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 CRB2Q5IJ48 1285 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 TIGD7Q6NT04 549 aaPredicted RBP7.49□□□□□ -1.21
NUP54-209ENST00000510569 HTR3DQ70Z44 454 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 POFUT1Q9H488 388 aa7.49□□□□□ -1.21
NUP54-209ENST00000510569 WDR33Q9C0J8 1336 aaKnown RBP7.49□□□□□ -1.21
NUP54-209ENST00000510569 MAFGO15525 162 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 OPHN1O60890 802 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 PRPF6O94906 941 aaKnown RBP7.48□□□□□ -1.21
NUP54-209ENST00000510569 F2P00734 622 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 HNRNPLP14866 589 aaKnown RBP eCLIP7.48□□□□□ -1.21
NUP54-209ENST00000510569 MAKP20794 623 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 ELAVL1Q15717 326 aaKnown RBP7.48□□□□□ -1.21
NUP54-209ENST00000510569 EFHBQ8N7U6 833 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 RTF1Q92541 710 aaKnown RBP7.48□□□□□ -1.21
NUP54-209ENST00000510569 CHFRQ96EP1 664 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 RNPC3Q96LT9 517 aaKnown RBP7.48□□□□□ -1.21
NUP54-209ENST00000510569 DRC1Q96MC2 740 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 MYL10Q9BUA6 226 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 MMRN2Q9H8L6 949 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 TOMM22Q9NS69 142 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 H2AFY2Q9P0M6 372 aaPredicted RBP7.48□□□□□ -1.21
NUP54-209ENST00000510569 SYNPO2Q9UMS6 1093 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 ZKSCAN5Q9Y2L8 839 aa7.48□□□□□ -1.21
NUP54-209ENST00000510569 A0A0A6YYK5 440 aaPredicted RBP7.47□□□□□ -1.21
NUP54-209ENST00000510569 GOLGA8BA8MQT2 603 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 OVOL3O00110 214 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 ADH4P08319 380 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 MAN2A2P49641 1150 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 RABGGTBP53611 331 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 LRRC32Q14392 662 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 FKBP15Q5T1M5 1219 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 MFSD5Q6N075 450 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 UNQ6494/PRO21346Q6UXR6 183 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 SOX7Q9BT81 388 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 PIF1Q9H611 641 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 RCAN3Q9UKA8 241 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 CD2APQ9Y5K6 639 aa7.47□□□□□ -1.21
NUP54-209ENST00000510569 DAPK3O43293 454 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 GAS7O60861 476 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 KIR2DL3P43628 341 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 INHBCP55103 352 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 SLC25A3Q00325 362 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 CNGB1Q14028 1251 aaPredicted RBP7.46□□□□□ -1.22
NUP54-209ENST00000510569 TOB2Q14106 344 aaPredicted RBP7.46□□□□□ -1.22
NUP54-209ENST00000510569 KRT40Q6A162 431 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 ZNF662Q6ZS27 426 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 PPP1R14CQ8TAE6 165 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 NEU4Q8WWR8 484 aaPredicted RBP7.46□□□□□ -1.22
NUP54-209ENST00000510569 LARP4BQ92615 738 aaKnown RBP7.46□□□□□ -1.22
NUP54-209ENST00000510569 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
NUP54-209ENST00000510569 KLRG2A4D1S0 409 aaPredicted RBP7.45□□□□□ -1.22
NUP54-209ENST00000510569 KPNA6O60684 536 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 CD40P25942 277 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 SMAD3P84022 425 aaKnown RBP7.45□□□□□ -1.22
NUP54-209ENST00000510569 SPIDRQ14159 915 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 MAN2A1Q16706 1144 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 C1QL3Q5VWW1 255 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 C16orf86Q6ZW13 317 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 LDLRAD3Q86YD5 345 aa7.45□□□□□ -1.22
NUP54-209ENST00000510569 HOMER1Q86YM7 354 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms