RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TMEM117Q9H0C3 514 aa25.68■■□□□ 1.7
SNF8-209ENST00000510558 AAASQ9NRG9 546 aa25.68■■□□□ 1.7
SNF8-209ENST00000510558 BMP2KQ9NSY1 1161 aaPredicted RBP25.68■■□□□ 1.7
SNF8-209ENST00000510558 TYW1Q9NV66 732 aaKnown RBP25.68■■□□□ 1.7
SNF8-209ENST00000510558 DACT1Q9NYF0 836 aa25.68■■□□□ 1.7
SNF8-209ENST00000510558 PCDHB12Q9Y5F1 795 aa25.68■■□□□ 1.7
SNF8-209ENST00000510558 A0A0U1RQF3 1178 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 ZBTB39O15060 712 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 SLITRK3O94933 977 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 ATP2B1P20020 1258 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 XKR9Q5GH70 373 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 RNF169Q8NCN4 708 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 POF1BQ8WVV4 589 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 PSPC1Q8WXF1 523 aaKnown RBP25.67■■□□□ 1.7
SNF8-209ENST00000510558 TMEM143Q96AN5 459 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 CWH43Q9H720 699 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 CHST12Q9NRB3 414 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 COL4A3BPQ9Y5P4 624 aa25.67■■□□□ 1.7
SNF8-209ENST00000510558 MCM7P33993 719 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 HYAL1Q12794 435 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 EMC2Q15006 297 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 EP400NLQ6ZTU2 488 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 FAM184AQ8NB25 1140 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 COLGALT1Q8NBJ5 622 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.66■■□□□ 1.7
SNF8-209ENST00000510558 NEK9Q8TD19 979 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 CASD1Q96PB1 797 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 HSD17B14Q9BPX1 270 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 TMEM60Q9H2L4 133 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 CLDND1Q9NY35 253 aa25.66■■□□□ 1.7
SNF8-209ENST00000510558 NCK2O43639 380 aa25.65■■□□□ 1.7
SNF8-209ENST00000510558 GAS2O43903 313 aaKnown RBP25.65■■□□□ 1.7
SNF8-209ENST00000510558 LYPLA2O95372 231 aa25.65■■□□□ 1.7
SNF8-209ENST00000510558 ZNF598Q86UK7 904 aaKnown RBP25.65■■□□□ 1.7
SNF8-209ENST00000510558 ABI1Q8IZP0 508 aa25.65■■□□□ 1.7
SNF8-209ENST00000510558 FBXO18Q8NFZ0 1043 aa25.65■■□□□ 1.7
SNF8-209ENST00000510558 PRPF31Q8WWY3 499 aaKnown RBP25.65■■□□□ 1.7
SNF8-209ENST00000510558 FOXP1Q9H334 677 aaPredicted RBP25.65■■□□□ 1.7
SNF8-209ENST00000510558 IFT122Q9HBG6 1241 aa25.65■■□□□ 1.7
SNF8-209ENST00000510558 PIN4Q9Y237 131 aaKnown RBP25.65■■□□□ 1.7
SNF8-209ENST00000510558 H3BQ06 376 aaPredicted RBP25.64■■□□□ 1.7
SNF8-209ENST00000510558 EOMESO95936 686 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 ATF7P17544 494 aaPredicted RBP25.64■■□□□ 1.7
SNF8-209ENST00000510558 LAG3P18627 525 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 IRS1P35568 1242 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 RABEP1Q15276 862 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 CLLU1OSQ5K130 101 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 CATSPER4Q7RTX7 472 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 LRRC43Q8N309 656 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 TCP11Q8WWU5 503 aa25.64■■□□□ 1.7
SNF8-209ENST00000510558 MUC3AQ02505 3323 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 POTEMA6NI47 508 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 UBE3AQ05086 875 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 LAMTOR4Q0VGL1 99 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 CSPP1Q1MSJ5 1256 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 CTC1Q2NKJ3 1217 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 TWF2Q6IBS0 349 aaKnown RBP25.63■■□□□ 1.69
SNF8-209ENST00000510558 PTCRAQ6ISU1 281 aaPredicted RBP25.63■■□□□ 1.69
SNF8-209ENST00000510558 LRRC55Q6ZSA7 311 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 THNSL1Q8IYQ7 743 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 PPP2R3CQ969Q6 453 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 MTRQ99707 1265 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 TRAIPQ9BWF2 469 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 ANKEF1Q9NU02 776 aa25.63■■□□□ 1.69
SNF8-209ENST00000510558 FGF18O76093 207 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 SRGAP2CP0DJJ0 459 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 GTF2F1P35269 517 aaKnown RBP eCLIP25.62■■□□□ 1.69
SNF8-209ENST00000510558 PHKA2P46019 1235 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 SRGAP1Q7Z6B7 1085 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 FERMT3Q86UX7 667 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 IGFLR1Q9H665 355 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 XPNPEP1Q9NQW7 623 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 BDP1A6H8Y1 2624 aa25.62■■□□□ 1.69
SNF8-209ENST00000510558 ASAP2O43150 1006 aa25.61■■□□□ 1.69
SNF8-209ENST00000510558 LTBRP36941 435 aa25.61■■□□□ 1.69
SNF8-209ENST00000510558 ORC2Q13416 577 aaPredicted RBP25.61■■□□□ 1.69
SNF8-209ENST00000510558 GNL2Q13823 731 aaKnown RBP25.61■■□□□ 1.69
SNF8-209ENST00000510558 ZNF174Q15697 407 aa25.61■■□□□ 1.69
SNF8-209ENST00000510558 PUS10Q3MIT2 529 aaKnown RBP25.61■■□□□ 1.69
SNF8-209ENST00000510558 ADGRD2Q7Z7M1 963 aa25.61■■□□□ 1.69
SNF8-209ENST00000510558 HELQQ8TDG4 1101 aa25.61■■□□□ 1.69
SNF8-209ENST00000510558 AGPAT5Q9NUQ2 364 aa25.61■■□□□ 1.69
SNF8-209ENST00000510558 SKIP12755 728 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 IL9P15248 144 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 NOSTRINQ8IVI9 506 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 RNF149Q8NC42 400 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 CCDC43Q96MW1 224 aaKnown RBP25.6■■□□□ 1.69
SNF8-209ENST00000510558 MINDY3Q9H8M7 445 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 TLR9Q9NR96 1032 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 FAM105AQ9NUU6 356 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 PCDHGC5Q9Y5F6 944 aa25.6■■□□□ 1.69
SNF8-209ENST00000510558 GRXCR2A6NFK2 248 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 ST18O60284 1047 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 OR52Z1P0C646 297 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 RARRES1P49788 294 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 TTC38Q5R3I4 469 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 KCNT2Q6UVM3 1135 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 PIGOQ8TEQ8 1089 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 ZNF558Q96NG5 402 aa25.59■■□□□ 1.69
SNF8-209ENST00000510558 UPF2Q9HAU5 1272 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms