RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RASSF10A6NK89 507 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 BRAFP15056 766 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 GBP1P32455 592 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 CLUL1Q15846 466 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 SYN2Q92777 582 aaPredicted RBP16.03■□□□□ 0.16
USP38-202ENST00000510377 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 ERP44Q9BS26 406 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 TNNI1P19237 187 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 FLT3P36888 993 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 SMTNP53814 917 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 WDR44Q5JSH3 913 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 SUGP1Q8IWZ8 645 aaKnown RBP16.03■□□□□ 0.16
USP38-202ENST00000510377 SH3GL2Q99962 352 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 EIF2AK1Q9BQI3 630 aaKnown RBP16.03■□□□□ 0.16
USP38-202ENST00000510377 ECT2Q9H8V3 914 aa16.03■□□□□ 0.16
USP38-202ENST00000510377 FOSP01100 380 aaPredicted RBP16.02■□□□□ 0.16
USP38-202ENST00000510377 ORC2Q13416 577 aaPredicted RBP16.02■□□□□ 0.16
USP38-202ENST00000510377 ALG6Q9Y672 507 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 SLIT3O75094 1523 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 CCT8L1PA6NM43 557 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 PDXKO00764 312 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 POLR2MP0CAP2 368 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 CASP5P51878 434 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 AGBL2Q5U5Z8 902 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 RHOT2Q8IXI1 618 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 PPP1R14CQ8TAE6 165 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 LMO7Q8WWI1 1683 aa16.02■□□□□ 0.16
USP38-202ENST00000510377 SSTR3P32745 418 aaPredicted RBP16.02■□□□□ 0.15
USP38-202ENST00000510377 EDRF1Q3B7T1 1238 aa16.02■□□□□ 0.15
USP38-202ENST00000510377 LRRC15Q8TF66 581 aa16.02■□□□□ 0.15
USP38-202ENST00000510377 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.15
USP38-202ENST00000510377 DAGLAQ9Y4D2 1042 aa16.02■□□□□ 0.15
USP38-202ENST00000510377 GPC5P78333 572 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 TAF11Q15544 211 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 RNF207Q6ZRF8 634 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 MCUR1Q96AQ8 359 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 BTBD6Q96KE9 485 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 CALR3Q96L12 384 aaKnown RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 INPP4AQ96PE3 977 aaPredicted RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 EMSYQ7Z589 1322 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 MYH10P35580 1976 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 ITGB3BPQ13352 177 aaPredicted RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 ECM1Q16610 540 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 DCUN1D2Q6PH85 259 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 LMNTD2Q8IXW0 634 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 SLC30A5Q8TAD4 765 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.01■□□□□ 0.155e-11■■■■■ 108.1
USP38-202ENST00000510377 ANAPC7Q9UJX3 599 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 TTC7AQ9ULT0 858 aaPredicted RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 OPLAHO14841 1288 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 DIAPH2O60879 1101 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 SHOX2O60902 331 aaPredicted RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 FMO5P49326 533 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 RWDD2BP57060 319 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 KCNA1Q09470 495 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 TRAF1Q13077 416 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 AADACL2Q6P093 401 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 VPS52Q8N1B4 723 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 HAUS1Q96CS2 278 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 PURBQ96QR8 312 aaKnown RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 PPP1R9AQ9ULJ8 1098 aa16.01■□□□□ 0.15
USP38-202ENST00000510377 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
USP38-202ENST00000510377 PODXLO00592 558 aa16■□□□□ 0.15
USP38-202ENST00000510377 RPS6KA4O75676 772 aa16■□□□□ 0.15
USP38-202ENST00000510377 BMP3P12645 472 aa16■□□□□ 0.15
USP38-202ENST00000510377 IFI35P80217 286 aaPredicted RBP16■□□□□ 0.15
USP38-202ENST00000510377 GPR162Q16538 588 aa16■□□□□ 0.15
USP38-202ENST00000510377 SYDE2Q5VT97 1194 aa16■□□□□ 0.15
USP38-202ENST00000510377 STMN2Q93045 179 aa16■□□□□ 0.15
USP38-202ENST00000510377 CCDC17Q96LX7 622 aa16■□□□□ 0.15
USP38-202ENST00000510377 RUSC1Q9BVN2 902 aa16■□□□□ 0.15
USP38-202ENST00000510377 NUP85Q9BW27 656 aa16■□□□□ 0.15
USP38-202ENST00000510377 PITPNM3Q9BZ71 974 aa16■□□□□ 0.15
USP38-202ENST00000510377 NOP53Q9NZM5 478 aaKnown RBP16■□□□□ 0.15
USP38-202ENST00000510377 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
USP38-202ENST00000510377 HNRNPH3P31942 346 aaKnown RBP16■□□□□ 0.15
USP38-202ENST00000510377 QPCTQ16769 361 aa16■□□□□ 0.15
USP38-202ENST00000510377 LIN9Q5TKA1 542 aa16■□□□□ 0.15
USP38-202ENST00000510377 FYB2Q5VWT5 728 aa16■□□□□ 0.15
USP38-202ENST00000510377 HGSNATQ68CP4 663 aa16■□□□□ 0.15
USP38-202ENST00000510377 CNPY4Q8N129 248 aa16■□□□□ 0.15
USP38-202ENST00000510377 TEKT3Q9BXF9 490 aa16■□□□□ 0.15
USP38-202ENST00000510377 SEMA4AQ9H3S1 761 aa16■□□□□ 0.15
USP38-202ENST00000510377 ETNK1Q9HBU6 452 aa16■□□□□ 0.15
USP38-202ENST00000510377 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
USP38-202ENST00000510377 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
USP38-202ENST00000510377 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
USP38-202ENST00000510377 ABCB11O95342 1321 aa16■□□□□ 0.15
USP38-202ENST00000510377 TCP10L2B9ZVM9 353 aa16■□□□□ 0.15
USP38-202ENST00000510377 F8VZ95 297 aa16■□□□□ 0.15
USP38-202ENST00000510377 CLDN3O15551 220 aa16■□□□□ 0.15
USP38-202ENST00000510377 SPAG7O75391 227 aa16■□□□□ 0.15
USP38-202ENST00000510377 IL9RQ01113 521 aa16■□□□□ 0.15
USP38-202ENST00000510377 DRP2Q13474 957 aa16■□□□□ 0.15
USP38-202ENST00000510377 BARGINQ6ZT62 677 aa16■□□□□ 0.15
USP38-202ENST00000510377 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms