RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 NECAB1Q8N987 351 aa29.86■■■□□ 2.37
SNF8-208ENST00000510195 MICAL1Q8TDZ2 1067 aa29.86■■■□□ 2.37
SNF8-208ENST00000510195 TNFRSF25Q93038 417 aa29.86■■■□□ 2.37
SNF8-208ENST00000510195 SH2D3AQ9BRG2 576 aa29.86■■■□□ 2.37
SNF8-208ENST00000510195 FDXACB1Q9BRP7 624 aaPredicted RBP29.86■■■□□ 2.37
SNF8-208ENST00000510195 PUF60Q9UHX1 559 aaKnown RBP29.86■■■□□ 2.37
SNF8-208ENST00000510195 CD207Q9UJ71 328 aa29.86■■■□□ 2.37
SNF8-208ENST00000510195 GPR37L1O60883 481 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 TBX10O75333 385 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 CSPG5O95196 566 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 SKIP12755 728 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 RFC5P40937 340 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 NR5A1Q13285 461 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 EARS2Q5JPH6 523 aaKnown RBP29.85■■■□□ 2.37
SNF8-208ENST00000510195 POTEDQ86YR6 584 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 NSUN7Q8NE18 718 aaKnown RBP29.85■■■□□ 2.37
SNF8-208ENST00000510195 KHSRPQ92945 711 aaKnown RBP eCLIP29.85■■■□□ 2.37
SNF8-208ENST00000510195 MSLNLQ96KJ4 702 aa29.85■■■□□ 2.37
SNF8-208ENST00000510195 CDCA3Q99618 268 aaPredicted RBP29.85■■■□□ 2.37
SNF8-208ENST00000510195 C5orf42Q9H799 3197 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 C19orf67A6NJJ6 358 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 LINC01565O15544 149 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 MBTPS2O43462 519 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 GAS2O43903 313 aaKnown RBP29.84■■■□□ 2.37
SNF8-208ENST00000510195 EYA4O95677 639 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 FGFR4P22455 802 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 NRIP1P48552 1158 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 NDUFV1P49821 464 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 ZP2Q05996 745 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 SPIRE1Q08AE8 756 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 TMEM31Q5JXX7 168 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 LRRC55Q6ZSA7 311 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 MRPS27Q92552 414 aaKnown RBP29.84■■■□□ 2.37
SNF8-208ENST00000510195 CEP170P1Q96L14 293 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 POP1Q99575 1024 aaKnown RBP29.84■■■□□ 2.37
SNF8-208ENST00000510195 LXNQ9BS40 222 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 MRPL9Q9BYD2 267 aaKnown RBP29.84■■■□□ 2.37
SNF8-208ENST00000510195 DHX33Q9H6R0 707 aaKnown RBP29.84■■■□□ 2.37
SNF8-208ENST00000510195 TLE6Q9H808 572 aa29.84■■■□□ 2.37
SNF8-208ENST00000510195 CARNS1A5YM72 827 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 LARGE1O95461 756 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 ALADP13716 330 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 PLA2G4FQ68DD2 849 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 KCNT2Q6UVM3 1135 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 ZNF558Q96NG5 402 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 ZSWIM4Q9H7M6 989 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 HCSTQ9UBK5 93 aa29.83■■■□□ 2.37
SNF8-208ENST00000510195 FSCN2O14926 492 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 CSDE1O75534 798 aaKnown RBP29.82■■■□□ 2.36
SNF8-208ENST00000510195 YWHABP31946 246 aaKnown RBP29.82■■■□□ 2.36
SNF8-208ENST00000510195 PHKA2P46019 1235 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 POLGP54098 1239 aaPredicted RBP29.82■■■□□ 2.36
SNF8-208ENST00000510195 NPEPPSP55786 919 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 KRT17Q04695 432 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 COASYQ13057 564 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 TRIM29Q14134 588 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 CLLU1OSQ5K130 101 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 WRAP73Q9P2S5 460 aaPredicted RBP29.82■■■□□ 2.36
SNF8-208ENST00000510195 COL4A3BPQ9Y5P4 624 aa29.82■■■□□ 2.36
SNF8-208ENST00000510195 ATF7P17544 494 aaPredicted RBP29.81■■■□□ 2.36
SNF8-208ENST00000510195 RAB27AP51159 221 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 ERVFC1P60507 584 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 NCAPH2Q6IBW4 605 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 RBM23Q86U06 439 aaKnown RBP29.81■■■□□ 2.36
SNF8-208ENST00000510195 RNF169Q8NCN4 708 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 TCP11Q8WWU5 503 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 LRFN3Q9BTN0 628 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 IFT122Q9HBG6 1241 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 NGRNQ9NPE2 291 aaKnown RBP29.81■■■□□ 2.36
SNF8-208ENST00000510195 CLEC1BQ9P126 229 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 PCDHA12Q9UN75 941 aa29.81■■■□□ 2.36
SNF8-208ENST00000510195 ASAP2O43150 1006 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 DTNBO60941 627 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 ZNF623O75123 536 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 CLUL1Q15846 466 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 TWF2Q6IBS0 349 aaKnown RBP29.8■■■□□ 2.36
SNF8-208ENST00000510195 CATSPER4Q7RTX7 472 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 SRGAP1Q7Z6B7 1085 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 SMRP1Q8NCR6 262 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 PSPC1Q8WXF1 523 aaKnown RBP29.8■■■□□ 2.36
SNF8-208ENST00000510195 NLRP4Q96MN2 994 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 SPG21Q9NZD8 308 aa29.8■■■□□ 2.36
SNF8-208ENST00000510195 PIN4Q9Y237 131 aaKnown RBP29.8■■■□□ 2.36
SNF8-208ENST00000510195 FAM205CA6NFA0 338 aa29.79■■■□□ 2.36
SNF8-208ENST00000510195 KSR1Q8IVT5 923 aa29.79■■■□□ 2.36
SNF8-208ENST00000510195 DIS3L2Q8IYB7 885 aaKnown RBP29.79■■■□□ 2.36
SNF8-208ENST00000510195 ZNF579Q8NAF0 562 aaKnown RBP29.79■■■□□ 2.36
SNF8-208ENST00000510195 HELQQ8TDG4 1101 aa29.79■■■□□ 2.36
SNF8-208ENST00000510195 PRPF31Q8WWY3 499 aaKnown RBP29.79■■■□□ 2.36
SNF8-208ENST00000510195 DYDC2Q96IM9 177 aa29.79■■■□□ 2.36
SNF8-208ENST00000510195 RGL1Q9NZL6 768 aa29.79■■■□□ 2.36
SNF8-208ENST00000510195 BTBD18B2RXH4 712 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 SLITRK3O94933 977 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 LYPLA2O95372 231 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 CALCRLQ16602 461 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 DUSP6Q16828 381 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 FAM105AQ9NUU6 356 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 PCDHGC5Q9Y5F6 944 aa29.78■■■□□ 2.36
SNF8-208ENST00000510195 GLP2RO95838 553 aa29.77■■■□□ 2.36
SNF8-208ENST00000510195 ALDH7A1P49419 539 aaKnown RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms