RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 DGKIO75912 1065 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 FGFR1P11362 822 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 FOSL2P15408 326 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 GRB10Q13322 594 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 PDIA5Q14554 519 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
SNF8-206ENST00000509989 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 SPECC1Q5M775 1068 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 USP49Q70CQ1 688 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 CHAMP1Q96JM3 812 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 YME1L1Q96TA2 773 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 POLR3FQ9H1D9 316 aaPredicted RBP15.11■□□□□ 0.01
SNF8-206ENST00000509989 USP20Q9Y2K6 914 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 INSL6Q9Y581 213 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 TCHHQ07283 1943 aa15.11■□□□□ 0.01
SNF8-206ENST00000509989 TTLL13PA6NNM8 815 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 EDN1P05305 212 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 ATF7P17544 494 aaPredicted RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 IGFBP4P22692 258 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 MARCKSP29966 332 aaPredicted RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 SARSP49591 514 aaKnown RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 DNM2P50570 870 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 ERVK-21P61565 698 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 FAM189BP81408 668 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 PADI6Q6TGC4 694 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 BRAPQ7Z569 592 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 RNF149Q8NC42 400 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 PSPC1Q8WXF1 523 aaKnown RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 PPM1EQ8WY54 764 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 USP28Q96RU2 1077 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 FTHL17Q9BXU8 183 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 GCOM2Q9BZD3 368 aaPredicted RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 BHMT2Q9H2M3 363 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 ATP6V0A4Q9HBG4 840 aa15.1■□□□□ 0.01
SNF8-206ENST00000509989 DBR1Q9UK59 544 aaKnown RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 MRPL42Q9Y6G3 142 aaKnown RBP15.1■□□□□ 0.01
SNF8-206ENST00000509989 DENND3A2RUS2 1198 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 DGAT1O75907 488 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 XRCC6P12956 609 aaKnown RBP eCLIP15.09■□□□□ 0.011e-6■■■■■ 27.1
SNF8-206ENST00000509989 FOXD4L6Q3SYB3 417 aaPredicted RBP15.09■□□□□ 0.01
SNF8-206ENST00000509989 FOXD4L3Q6VB84 417 aaPredicted RBP15.09■□□□□ 0.01
SNF8-206ENST00000509989 ZNF410Q86VK4 478 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 CDR2LQ86X02 465 aaPredicted RBP15.09■□□□□ 0.01
SNF8-206ENST00000509989 NPAS4Q8IUM7 802 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 ERMNQ8TAM6 284 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 LPPQ93052 612 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 CLIC6Q96NY7 704 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 RUSC1Q9BVN2 902 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 ADGRA3Q8IWK6 1321 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 TRIP11Q15643 1979 aa15.09■□□□□ 0.01
SNF8-206ENST00000509989 LAD1O00515 517 aa15.08■□□□□ 0
SNF8-206ENST00000509989 B4GALT5O43286 388 aa15.08■□□□□ 0
SNF8-206ENST00000509989 PDCP20941 246 aa15.08■□□□□ 0
SNF8-206ENST00000509989 HOXA11P31270 313 aaPredicted RBP15.08■□□□□ 0
SNF8-206ENST00000509989 PTENP60484 403 aa15.08■□□□□ 0
SNF8-206ENST00000509989 UBXN11Q5T124 520 aa15.08■□□□□ 0
SNF8-206ENST00000509989 LRRC55Q6ZSA7 311 aa15.08■□□□□ 0
SNF8-206ENST00000509989 SLC24A5Q71RS6 500 aa15.08■□□□□ 0
SNF8-206ENST00000509989 ZNF598Q86UK7 904 aaKnown RBP15.08■□□□□ 0
SNF8-206ENST00000509989 ECHDC2Q86YB7 292 aa15.08■□□□□ 0
SNF8-206ENST00000509989 MAFAQ8NHW3 353 aaPredicted RBP15.08■□□□□ 0
SNF8-206ENST00000509989 CPB2Q96IY4 423 aa15.08■□□□□ 0
SNF8-206ENST00000509989 TGS1Q96RS0 853 aaKnown RBP15.08■□□□□ 0
SNF8-206ENST00000509989 KIFC3Q9BVG8 833 aa15.08■□□□□ 0
SNF8-206ENST00000509989 TFIP11Q9UBB9 837 aaKnown RBP15.08■□□□□ 0
SNF8-206ENST00000509989 FBXO2Q9UK22 296 aaPredicted RBP15.08■□□□□ 0
SNF8-206ENST00000509989 PPME1Q9Y570 386 aa15.08■□□□□ 0
SNF8-206ENST00000509989 MTCH2Q9Y6C9 303 aa15.08■□□□□ 0
SNF8-206ENST00000509989 NPHP3-ACAD11A0A0J9YXS1 232 aa15.07■□□□□ 0
SNF8-206ENST00000509989 ARHGEF35A5YM69 484 aa15.07■□□□□ 0
SNF8-206ENST00000509989 CYP11B2P19099 503 aa15.07■□□□□ 0
SNF8-206ENST00000509989 MBTD1Q05BQ5 628 aa15.07■□□□□ 0
SNF8-206ENST00000509989 BTG3Q14201 252 aaPredicted RBP15.07■□□□□ 0
SNF8-206ENST00000509989 KARSQ15046 597 aaKnown RBP15.07■□□□□ 0
SNF8-206ENST00000509989 AMHR2Q16671 573 aa15.07■□□□□ 0
SNF8-206ENST00000509989 EPC2Q52LR7 807 aa15.07■□□□□ 0
SNF8-206ENST00000509989 CLLU1OSQ5K130 101 aa15.07■□□□□ 0
SNF8-206ENST00000509989 KRT79Q5XKE5 535 aa15.07■□□□□ 0
SNF8-206ENST00000509989 HAUS3Q68CZ6 603 aa15.07■□□□□ 0
SNF8-206ENST00000509989 CATSPER4Q7RTX7 472 aa15.07■□□□□ 0
SNF8-206ENST00000509989 TMEM192Q8IY95 271 aa15.07■□□□□ 0
SNF8-206ENST00000509989 DAW1Q8N136 415 aa15.07■□□□□ 0
SNF8-206ENST00000509989 MICALL1Q8N3F8 863 aa15.07■□□□□ 0
SNF8-206ENST00000509989 RNF169Q8NCN4 708 aa15.07■□□□□ 0
SNF8-206ENST00000509989 TCP11Q8WWU5 503 aa15.07■□□□□ 0
SNF8-206ENST00000509989 EPSTI1Q96J88 318 aa15.07■□□□□ 0
SNF8-206ENST00000509989 CCDC43Q96MW1 224 aaKnown RBP15.07■□□□□ 0
SNF8-206ENST00000509989 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
SNF8-206ENST00000509989 CSRNP2Q9H175 543 aa15.07■□□□□ 0
SNF8-206ENST00000509989 PIN4Q9Y237 131 aaKnown RBP15.07■□□□□ 0
SNF8-206ENST00000509989 ZDHHC9Q9Y397 364 aa15.07■□□□□ 0
SNF8-206ENST00000509989 BRWD1Q9NSI6 2320 aa15.06■□□□□ 0
SNF8-206ENST00000509989 TBKBP1A7MCY6 615 aa15.06■□□□□ 0
SNF8-206ENST00000509989 SFI1A8K8P3 1242 aa15.06■□□□□ 0
SNF8-206ENST00000509989 TSPAN1O60635 241 aa15.06■□□□□ 0
SNF8-206ENST00000509989 CSPG5O95196 566 aa15.06■□□□□ 0
SNF8-206ENST00000509989 EYA4O95677 639 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms