RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.21□□□□□ -1.09
CAST-228ENST00000509903 UNC93B1Q9H1C4 597 aa8.21□□□□□ -1.09
CAST-228ENST00000509903 BHMT2Q9H2M3 363 aa8.21□□□□□ -1.09
CAST-228ENST00000509903 ARMCX3Q9UH62 379 aaPredicted RBP8.21□□□□□ -1.09
CAST-228ENST00000509903 HDAC9Q9UKV0 1011 aa8.21□□□□□ -1.09
CAST-228ENST00000509903 SYNPO2Q9UMS6 1093 aa8.21□□□□□ -1.09
CAST-228ENST00000509903 RABGAP1Q9Y3P9 1069 aa8.21□□□□□ -1.09
CAST-228ENST00000509903 A0A0U1RQG5 324 aaPredicted RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 TCP10L2B9ZVM9 353 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 CFBP00751 764 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 PRLRP16471 622 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 JAG1P78504 1218 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 KLHL30Q0D2K2 578 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 USP4Q13107 963 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 ASIC2Q16515 512 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 ASTE1Q2TB18 679 aaPredicted RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 MEI1Q5TIA1 1274 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 ZC3H3Q8IXZ2 948 aaKnown RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 RNF10Q8N5U6 811 aaKnown RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 CYP2W1Q8TAV3 490 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 ARMC5Q96C12 935 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 OSBPL9Q96SU4 736 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 PSMB7Q99436 277 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 EIF2AK1Q9BQI3 630 aaKnown RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 POLR3CQ9BUI4 534 aaPredicted RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.21□□□□□ -1.1
CAST-228ENST00000509903 VPS18Q9P253 973 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 VAV3Q9UKW4 847 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 TRAF3IP3Q9Y228 551 aa8.21□□□□□ -1.1
CAST-228ENST00000509903 COL2A1P02458 1487 aaPredicted RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 CLRN2A0PK11 232 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 RBAK-RBAKDNI3L0D1 243 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 PDXKO00764 312 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 OPLAHO14841 1288 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 CHMP2AO43633 222 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 BUB1O43683 1085 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 TLR2O60603 784 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 PRPF6O94906 941 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 GCNT3O95395 438 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 EYA4O95677 639 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 AFPP02771 609 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 CYP3A4P08684 503 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 MYBP10242 640 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 XRCC5P13010 732 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 RPL13P26373 211 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 ECE1P42892 770 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 PAFAH1B1P43034 410 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 MCCD1P59942 119 aaPredicted RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 RRP1BQ14684 758 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 DCAF17Q5H9S7 520 aaPredicted RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 TCERG1LQ5VWI1 586 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 NFRKBQ6P4R8 1299 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 CCDC174Q6PII3 467 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 FRMD5Q7Z6J6 570 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 CREG2Q8IUH2 290 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 FAM133AQ8N9E0 248 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 COG1Q8WTW3 980 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 TBC1D5Q92609 795 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 COL26A1Q96A83 441 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 SPAG5Q96R06 1193 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 EHMT1Q9H9B1 1298 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 CYLDQ9NQC7 956 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 TYW1Q9NV66 732 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 A6NHS1 94 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 LRRIQ3A6PVS8 624 aaPredicted RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 RSPH10B2B2RC85 870 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 NR3C1P04150 777 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 RSPH10BP0C881 870 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 POLR2MP0CAP2 368 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 EPB41P11171 864 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 GAP43P17677 238 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 IGFBP4P22692 258 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 GNA15P30679 374 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 CXCR5P32302 372 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 MATR3P43243 847 aaKnown RBP eCLIP8.2□□□□□ -1.1
CAST-228ENST00000509903 APBA1Q02410 837 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 ITIH3Q06033 890 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 SLC18A3Q16572 532 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 EXOC3L4Q17RC7 722 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 LINC01559Q495D7 138 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 LRCH2Q5VUJ6 765 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 EPM2AIP1Q7L775 607 aaPredicted RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 TEX2Q8IWB9 1127 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 TPH2Q8IWU9 490 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 ZBTB9Q96C00 473 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 VIPAS39Q9H9C1 493 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 METTL14Q9HCE5 456 aaKnown RBP8.2□□□□□ -1.1
CAST-228ENST00000509903 MED4Q9NPJ6 270 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 RGL1Q9NZL6 768 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 SALL4Q9UJQ4 1053 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 ADAM21Q9UKJ8 722 aa8.2□□□□□ -1.1
CAST-228ENST00000509903 ZNF646O15015 1829 aaPredicted RBP8.19□□□□□ -1.1
CAST-228ENST00000509903 YDJCA8MPS7 323 aa8.19□□□□□ -1.1
CAST-228ENST00000509903 EML1O00423 815 aa8.19□□□□□ -1.1
CAST-228ENST00000509903 NCK2O43639 380 aa8.19□□□□□ -1.1
CAST-228ENST00000509903 PPP1R12BO60237 982 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms