RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 WASF1Q92558 559 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 MSLNLQ96KJ4 702 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 CDCA3Q99618 268 aaPredicted RBP17.26■□□□□ 0.35
TPM3-219ENST00000509409 NAP1L4Q99733 375 aaKnown RBP17.26■□□□□ 0.35
TPM3-219ENST00000509409 ENTPD7Q9NQZ7 604 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 CHST12Q9NRB3 414 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 GJB4Q9NTQ9 266 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 RNF19AQ9NV58 838 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
TPM3-219ENST00000509409 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 PRR33A8MZF0 331 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
TPM3-219ENST00000509409 EYA4O95677 639 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 P4HBP07237 508 aaKnown RBP17.25■□□□□ 0.35
TPM3-219ENST00000509409 GCFC2P16383 781 aaKnown RBP17.25■□□□□ 0.35
TPM3-219ENST00000509409 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
TPM3-219ENST00000509409 PBX3P40426 434 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 PLCB3Q01970 1234 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 COASYQ13057 564 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 PPP2R5CQ13362 524 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 PLA2G4FQ68DD2 849 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
TPM3-219ENST00000509409 PPP4R3AQ6IN85 833 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 ANO5Q75V66 913 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 TMC7Q7Z402 723 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 OXER1Q8TDS5 423 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 CEP170P1Q96L14 293 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 NLRP4Q96MN2 994 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 CEP89Q96ST8 783 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 TCF25Q9BQ70 676 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 SPG21Q9NZD8 308 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
TPM3-219ENST00000509409 STK36Q9NRP7 1315 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 FSD2A1L4K1 749 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 FSCN2O14926 492 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 CA8P35219 290 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 PPM1AP35813 382 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 PLA2G5P39877 138 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 AK2P54819 239 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 NPEPPSP55786 919 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 ANAPC15P60006 121 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 DUSP6Q16828 381 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 LONRF3Q496Y0 759 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 CLLU1OSQ5K130 101 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 CATSPER4Q7RTX7 472 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 ZNF410Q86VK4 478 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
TPM3-219ENST00000509409 CYP26B1Q9NR63 512 aa17.24■□□□□ 0.35
TPM3-219ENST00000509409 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
TPM3-219ENST00000509409 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 GLP2RO95838 553 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 SRGAP2BP0DMP2 458 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 SKIP12755 728 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 KRT2P35908 639 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 ALDH7A1P49419 539 aaKnown RBP17.23■□□□□ 0.35
TPM3-219ENST00000509409 POLGP54098 1239 aaPredicted RBP17.23■□□□□ 0.35
TPM3-219ENST00000509409 BMS1Q14692 1282 aaKnown RBP17.23■□□□□ 0.35
TPM3-219ENST00000509409 EPHA7Q15375 998 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 NCAPH2Q6IBW4 605 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 LLGL2Q6P1M3 1020 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 OTUD6AQ7L8S5 288 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 ZNF598Q86UK7 904 aaKnown RBP17.23■□□□□ 0.35
TPM3-219ENST00000509409 RNF135Q8IUD6 432 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 SMRP1Q8NCR6 262 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 MRPL9Q9BYD2 267 aaKnown RBP17.23■□□□□ 0.35
TPM3-219ENST00000509409 VAV3Q9UKW4 847 aa17.23■□□□□ 0.35
TPM3-219ENST00000509409 NT5C1B-RDH14C9J2C7 533 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 TBX3O15119 743 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 SRGAP2CP0DJJ0 459 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 TECP42680 631 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 PHKA2P46019 1235 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
TPM3-219ENST00000509409 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
TPM3-219ENST00000509409 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 HAS1Q92839 578 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 TMEM143Q96AN5 459 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 DYDC2Q96IM9 177 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 MUTYHQ9UIF7 546 aa17.22■□□□□ 0.35
TPM3-219ENST00000509409 USP15Q9Y4E8 981 aaPredicted RBP17.22■□□□□ 0.35
TPM3-219ENST00000509409 HIDE1A8MVS5 230 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 ATF7P17544 494 aaPredicted RBP17.21■□□□□ 0.35
TPM3-219ENST00000509409 FOSBP53539 338 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 BCAR1P56945 870 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 NR5A1Q13285 461 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
TPM3-219ENST00000509409 SLFN12Q8IYM2 578 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 VN1R2Q8NFZ6 395 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
TPM3-219ENST00000509409 PSPC1Q8WXF1 523 aaKnown RBP17.21■□□□□ 0.35
TPM3-219ENST00000509409 LPPQ93052 612 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 RPGRIP1Q96KN7 1286 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 LXNQ9BS40 222 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 APOL5Q9BWW9 433 aa17.21■□□□□ 0.35
TPM3-219ENST00000509409 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms