RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GPC3P51654 580 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 POLGP54098 1239 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 SLC39A14Q15043 492 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 AAK1Q2M2I8 961 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 TJAP1Q5JTD0 557 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 FAM43BQ6ZT52 329 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 SLC24A5Q71RS6 500 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 FAM228AQ86W67 206 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 RHPN2Q8IUC4 686 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 EXOC8Q8IYI6 725 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 RNF169Q8NCN4 708 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 LINC01599Q8WXQ3 324 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 EPSTI1Q96J88 318 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 COL25A1Q9BXS0 654 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 GCOM2Q9BZD3 368 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 CSRNP2Q9H175 543 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 ZSWIM4Q9H7M6 989 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 ATP6V0A4Q9HBG4 840 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 XPNPEP1Q9NQW7 623 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 CYP26B1Q9NR63 512 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 MORC2Q9Y6X9 1032 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 REV3LO60673 3130 aa9.75□□□□□ -0.85
PDLIM5-213ENST00000509357 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 MICAL3Q7RTP6 2002 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 TBKBP1A7MCY6 615 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 H3BNC9 293 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 MGEA5O60502 916 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 LPXNO60711 386 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 MAFO75444 373 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 RB1P06400 928 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 FGFR4P22455 802 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 YWHABP31946 246 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 BMPR1AP36894 532 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 RFC5P40937 340 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 TMEM119Q4V9L6 283 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 NAALADL2Q58DX5 795 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 XKR9Q5GH70 373 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 SHC4Q6S5L8 630 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 EP400NLQ6ZTU2 488 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 C4orf19Q8IY42 314 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 ABI1Q8IZP0 508 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 PIGOQ8TEQ8 1089 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 HLA-CQ95604 372 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 MRPL38Q96DV4 380 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 NLRP4Q96MN2 994 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 ASB2Q96Q27 587 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 PLIN2Q99541 437 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 INO80BQ9C086 356 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 ADAMTS10Q9H324 1103 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 RGS18Q9NS28 235 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 COG5Q9UP83 839 aa9.74□□□□□ -0.85
PDLIM5-213ENST00000509357 A0A087WZ62 844 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 IGKV6-21A0A0C4DH24 114 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 E9PMD0 336 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 LAD1O00515 517 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 CSDE1O75534 798 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 LYPLA2O95372 231 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 SRGAP2CP0DJJ0 459 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 DARSP14868 501 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 SFPQP23246 707 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 RPA1P27694 616 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 RARRES1P49788 294 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 GATMP50440 423 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 TFF2Q03403 129 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 TIGD5Q53EQ6 642 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 HYIQ5T013 277 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 ARL6IP4Q66PJ3 421 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 CMTR2Q8IYT2 770 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 LEO1Q8WVC0 666 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 PSPC1Q8WXF1 523 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 TMEM143Q96AN5 459 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 ZNF689Q96CS4 500 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 FDXACB1Q9BRP7 624 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 POLR3CQ9BUI4 534 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 POLD4Q9HCU8 107 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 AAASQ9NRG9 546 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 BLOC1S4Q9NUP1 217 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 RCOR1Q9UKL0 485 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 PCDHA7Q9UN72 937 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 PPME1Q9Y570 386 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 SRPRBQ9Y5M8 271 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 MRPL42Q9Y6G3 142 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 MYH11P35749 1972 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 VCANP13611 3396 aa9.73□□□□□ -0.85
PDLIM5-213ENST00000509357 C9IYK1 514 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 HOXA2O43364 376 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 YEATS4O95619 227 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 ANP32AP39687 249 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 PDIA5Q14554 519 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 EMC2Q15006 297 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 KARSQ15046 597 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 FAM102BQ5T8I3 360 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 TWF2Q6IBS0 349 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 ZNF410Q86VK4 478 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 KSR1Q8IVT5 923 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 ERMNQ8TAM6 284 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms