RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SLITRK3O94933 977 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 DNAJB1P25685 340 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 EMC2Q15006 297 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 ZNF174Q15697 407 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 OTUD6AQ7L8S5 288 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 ZNF710Q8N1W2 664 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 JPH2Q9BR39 696 aaPredicted RBP16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 IGFLR1Q9H665 355 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 TYW1Q9NV66 732 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 PIN4Q9Y237 131 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
UBE2D3-228ENST00000508974 H3BQ06 376 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 SFPQP23246 707 aaKnown RBP eCLIP16.54■□□□□ 0.243e-6■□□□□ 10.5
UBE2D3-228ENST00000508974 RFC5P40937 340 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 FAM189BP81408 668 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 NBR1Q14596 966 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 RABEP1Q15276 862 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 CATSPER4Q7RTX7 472 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 ABI1Q8IZP0 508 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 P2RX5Q93086 422 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 CCDC43Q96MW1 224 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 MTMR9Q96QG7 549 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 LMAN2LQ9H0V9 348 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 DHX33Q9H6R0 707 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 ELAC1Q9H777 363 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 RNF19AQ9NV58 838 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 CLDND1Q9NY35 253 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 PCDHGC5Q9Y5F6 944 aa16.54■□□□□ 0.24
UBE2D3-228ENST00000508974 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 ST18O60284 1047 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.247e-7■■■□□ 15.7
UBE2D3-228ENST00000508974 IRS1P35568 1242 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 PBX3P40426 434 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 CDC42EP1Q00587 391 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 CAMK1Q14012 370 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 TWF2Q6IBS0 349 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 ZNF410Q86VK4 478 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 THNSL1Q8IYQ7 743 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 COLGALT1Q8NBJ5 622 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 SPPL3Q8TCT6 385 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 HELQQ8TDG4 1101 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 POF1BQ8WVV4 589 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 PSPC1Q8WXF1 523 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 CASD1Q96PB1 797 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 MTRQ99707 1265 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 FOXP1Q9H334 677 aaPredicted RBP16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
UBE2D3-228ENST00000508974 CD2BP2O95400 341 aaKnown RBP16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 TECP42680 631 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 LAMTOR4Q0VGL1 99 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 HYAL1Q12794 435 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 CLUL1Q15846 466 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 CLLU1OSQ5K130 101 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 TTC38Q5R3I4 469 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 LRRC55Q6ZSA7 311 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 ADGRD2Q7Z7M1 963 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 NOSTRINQ8IVI9 506 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 LPPQ93052 612 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 HSD17B14Q9BPX1 270 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 TMEM117Q9H0C3 514 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 CWH43Q9H720 699 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 MINDY3Q9H8M7 445 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 AAASQ9NRG9 546 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 DACT1Q9NYF0 836 aa16.52■□□□□ 0.24
UBE2D3-228ENST00000508974 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 A0A0U1RQF3 1178 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 LINC01565O15544 149 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 HOXA2O43364 376 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 FGF18O76093 207 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 OR52Z1P0C646 297 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 ATF7P17544 494 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 FAM43BQ6ZT52 329 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 RBM23Q86U06 439 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 EXOC8Q8IYI6 725 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 RNF149Q8NC42 400 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 PABPC5Q96DU9 382 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 XPNPEP1Q9NQW7 623 aa16.51■□□□□ 0.23
UBE2D3-228ENST00000508974 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 MED24O75448 989 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 IL9P15248 144 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 LAG3P18627 525 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 PHKA2P46019 1235 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 NAALADL2Q58DX5 795 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 PTCRAQ6ISU1 281 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 MAEAQ7L5Y9 396 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms