RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 ZNF410Q86VK4 478 aa24.7■■□□□ 1.54
PACRGL-220ENST00000508952 SLC7A3Q8WY07 619 aa24.7■■□□□ 1.54
PACRGL-220ENST00000508952 TMEM143Q96AN5 459 aa24.7■■□□□ 1.54
PACRGL-220ENST00000508952 AAASQ9NRG9 546 aa24.7■■□□□ 1.54
PACRGL-220ENST00000508952 PCDHGC5Q9Y5F6 944 aa24.7■■□□□ 1.54
PACRGL-220ENST00000508952 LINC01565O15544 149 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 HOXA2O43364 376 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 NEMFO60524 1076 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 SFPQP23246 707 aaKnown RBP eCLIP24.69■■□□□ 1.54
PACRGL-220ENST00000508952 DLX2Q07687 328 aaPredicted RBP24.69■■□□□ 1.54
PACRGL-220ENST00000508952 CTC1Q2NKJ3 1217 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 CLLU1OSQ5K130 101 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 LRRC55Q6ZSA7 311 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 TPH2Q8IWU9 490 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 THNSL1Q8IYQ7 743 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 DHX33Q9H6R0 707 aaKnown RBP24.69■■□□□ 1.54
PACRGL-220ENST00000508952 ZSWIM4Q9H7M6 989 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 DACT1Q9NYF0 836 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 PCDHA12Q9UN75 941 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 COL4A3BPQ9Y5P4 624 aa24.69■■□□□ 1.54
PACRGL-220ENST00000508952 A0A0U1RQF3 1178 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 GRXCR2A6NFK2 248 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 NCK2O43639 380 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 FGF18O76093 207 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 SLITRK3O94933 977 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 ATF7P17544 494 aaPredicted RBP24.68■■□□□ 1.54
PACRGL-220ENST00000508952 CLUL1Q15846 466 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 XKR9Q5GH70 373 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 ZNF598Q86UK7 904 aaKnown RBP24.68■■□□□ 1.54
PACRGL-220ENST00000508952 ABI1Q8IZP0 508 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 PRPF31Q8WWY3 499 aaKnown RBP24.68■■□□□ 1.54
PACRGL-220ENST00000508952 EIF2AK1Q9BQI3 630 aaKnown RBP24.68■■□□□ 1.54
PACRGL-220ENST00000508952 TTC12Q9H892 705 aaPredicted RBP24.68■■□□□ 1.54
PACRGL-220ENST00000508952 CD320Q9NPF0 282 aa24.68■■□□□ 1.54
PACRGL-220ENST00000508952 PIN4Q9Y237 131 aaKnown RBP24.68■■□□□ 1.54
PACRGL-220ENST00000508952 TBX10O75333 385 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 LAG3P18627 525 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 ATP2B1P20020 1258 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 RFC5P40937 340 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 TXKP42681 527 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 EMC2Q15006 297 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 OTUD6AQ7L8S5 288 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 CATSPER4Q7RTX7 472 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 FAM178BQ8IXR5 827 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 LRRC43Q8N309 656 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 HELQQ8TDG4 1101 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 INO80BQ9C086 356 aaPredicted RBP24.67■■□□□ 1.54
PACRGL-220ENST00000508952 IFT122Q9HBG6 1241 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 CHST12Q9NRB3 414 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 PPME1Q9Y570 386 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 C5orf42Q9H799 3197 aa24.67■■□□□ 1.54
PACRGL-220ENST00000508952 PBX3P40426 434 aa24.66■■□□□ 1.54
PACRGL-220ENST00000508952 SAFBQ15424 915 aaKnown RBP eCLIP24.66■■□□□ 1.54
PACRGL-220ENST00000508952 PUS10Q3MIT2 529 aaKnown RBP24.66■■□□□ 1.54
PACRGL-220ENST00000508952 TWF2Q6IBS0 349 aaKnown RBP24.66■■□□□ 1.54
PACRGL-220ENST00000508952 RBM23Q86U06 439 aaKnown RBP24.66■■□□□ 1.54
PACRGL-220ENST00000508952 PSPC1Q8WXF1 523 aaKnown RBP24.66■■□□□ 1.54
PACRGL-220ENST00000508952 PPP2R3CQ969Q6 453 aa24.66■■□□□ 1.54
PACRGL-220ENST00000508952 C8orf76Q96K31 380 aa24.66■■□□□ 1.54
PACRGL-220ENST00000508952 MTMR9Q96QG7 549 aa24.66■■□□□ 1.54
PACRGL-220ENST00000508952 LLPHQ9BRT6 129 aaKnown RBP24.66■■□□□ 1.54
PACRGL-220ENST00000508952 TMEM60Q9H2L4 133 aa24.66■■□□□ 1.54
PACRGL-220ENST00000508952 EOMESO95936 686 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 SRGAP2CP0DJJ0 459 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 MCM7P33993 719 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 PHKA2P46019 1235 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 NRIP1P48552 1158 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 UBE3AQ05086 875 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 LAMTOR4Q0VGL1 99 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 LONRF3Q496Y0 759 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 EXOC8Q8IYI6 725 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 MICAL1Q8TDZ2 1067 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 KHSRPQ92945 711 aaKnown RBP eCLIP24.65■■□□□ 1.542e-6■■■■□ 20.1
PACRGL-220ENST00000508952 ZSCAN31Q96LW9 406 aaPredicted RBP24.65■■□□□ 1.54
PACRGL-220ENST00000508952 HSD17B14Q9BPX1 270 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 MINDY3Q9H8M7 445 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 TLR9Q9NR96 1032 aa24.65■■□□□ 1.54
PACRGL-220ENST00000508952 POTEMA6NI47 508 aa24.64■■□□□ 1.54
PACRGL-220ENST00000508952 ADAM15Q13444 863 aa24.64■■□□□ 1.54
PACRGL-220ENST00000508952 CSPP1Q1MSJ5 1256 aa24.64■■□□□ 1.54
PACRGL-220ENST00000508952 KCNT2Q6UVM3 1135 aa24.64■■□□□ 1.54
PACRGL-220ENST00000508952 LPPQ93052 612 aa24.64■■□□□ 1.54
PACRGL-220ENST00000508952 ZNF558Q96NG5 402 aa24.64■■□□□ 1.54
PACRGL-220ENST00000508952 ERVFC1P60507 584 aa24.63■■□□□ 1.53
PACRGL-220ENST00000508952 TCP11Q8WWU5 503 aa24.63■■□□□ 1.53
PACRGL-220ENST00000508952 MTRQ99707 1265 aa24.63■■□□□ 1.53
PACRGL-220ENST00000508952 TRAIPQ9BWF2 469 aa24.63■■□□□ 1.53
PACRGL-220ENST00000508952 XPNPEP1Q9NQW7 623 aa24.63■■□□□ 1.53
PACRGL-220ENST00000508952 SH2B1Q9NRF2 756 aaPredicted RBP24.63■■□□□ 1.53
PACRGL-220ENST00000508952 A0A087WWV3 80 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 GAS2O43903 313 aaKnown RBP24.62■■□□□ 1.53
PACRGL-220ENST00000508952 LYPLA2O95372 231 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 SSTR3P32745 418 aaPredicted RBP24.62■■□□□ 1.53
PACRGL-220ENST00000508952 NDUFV1P49821 464 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 FERMT3Q86UX7 667 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 EFHBQ8N7U6 833 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 RNF149Q8NC42 400 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 EPHX3Q9H6B9 360 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 TLE6Q9H808 572 aa24.62■■□□□ 1.53
PACRGL-220ENST00000508952 AGPAT5Q9NUQ2 364 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms