RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 MCPH1Q8NEM0 835 aa16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 RAD9AQ99638 391 aa16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 INO80BQ9C086 356 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 ZNF576Q9H609 170 aa16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 IFT122Q9HBG6 1241 aa16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
SH3TC1-216ENST00000508641 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 ZSCAN20P17040 1043 aaPredicted RBP16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 TFDP1Q14186 410 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 HYIQ5T013 277 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 PPP2R2DQ66LE6 453 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 USP49Q70CQ1 688 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 CATSPER4Q7RTX7 472 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 CALML4Q96GE6 196 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 MINDY3Q9H8M7 445 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 INSL6Q9Y581 213 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
SH3TC1-216ENST00000508641 ARHGEF15O94989 841 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 GLRA2P23416 452 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 PHKA2P46019 1235 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 CAPSQ13938 189 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 DSC3Q14574 896 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 KARSQ15046 597 aaKnown RBP16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 TMEM119Q4V9L6 283 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 KRI1Q8N9T8 703 aaKnown RBP16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 YME1L1Q96TA2 773 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 CERS4Q9HA82 394 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 MTMR10Q9NXD2 777 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 LRFN2Q9ULH4 789 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 MYO9BQ13459 2157 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 TTC3P53804 2025 aa16.28■□□□□ 0.2
SH3TC1-216ENST00000508641 TMEM265A0A087WTH1 108 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 LRRIQ4A6NIV6 560 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 SPTLC2O15270 562 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 BRD1O95696 1058 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 PLA2G4BP0C869 781 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 TAP1Q03518 808 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 GRIN2CQ14957 1233 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 SLC24A5Q71RS6 500 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 SRGAP1Q7Z6B7 1085 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 RUSC1Q9BVN2 902 aa16.27■□□□□ 0.2
SH3TC1-216ENST00000508641 C9IYK1 514 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 SLC26A4O43511 780 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 PLCG1P19174 1290 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 SARSP49591 514 aaKnown RBP16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 PTENP60484 403 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 HTRA4P83105 476 aaPredicted RBP16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 RINT1Q6NUQ1 792 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 FAM43BQ6ZT52 329 aaPredicted RBP16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 C1orf186Q6ZWK4 172 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 SPRED2Q7Z698 418 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 NPAS4Q8IUM7 802 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 BSNDQ8WZ55 320 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 PANK2Q9BZ23 570 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 CCSER1Q9C0I3 900 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 C1orf112Q9NSG2 853 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 PIN4Q9Y237 131 aaKnown RBP16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 PCDHB7Q9Y5E2 793 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
SH3TC1-216ENST00000508641 YEATS4O95619 227 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 FAM189BP81408 668 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 CRIPAKQ8N1N5 446 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 KCTD17Q8N5Z5 321 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 SYT2Q8N9I0 419 aaPredicted RBP16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 LRRC15Q8TF66 581 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 ARNTL2Q8WYA1 636 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 KIFAP3Q92845 792 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 CDX2Q99626 313 aaPredicted RBP16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 PRDM12Q9H4Q4 367 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 CHST12Q9NRB3 414 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 DACT1Q9NYF0 836 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 CFAP45Q9UL16 551 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 MTUS1Q9ULD2 1270 aa16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
SH3TC1-216ENST00000508641 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
SH3TC1-216ENST00000508641 LINC01553A4QN01 128 aa16.24■□□□□ 0.19
SH3TC1-216ENST00000508641 SFI1A8K8P3 1242 aa16.24■□□□□ 0.19
SH3TC1-216ENST00000508641 HIP1RO75146 1068 aa16.24■□□□□ 0.19
SH3TC1-216ENST00000508641 PPP6R2O75170 966 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms