RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 PCBP1Q15365 356 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 FNDC3BQ53EP0 1204 aaKnown RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 MZT2BQ6NZ67 158 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 C1orf122Q6ZSJ8 110 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 ARHGEF18Q6ZSZ5 1173 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 EPM2AIP1Q7L775 607 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 PNMA8AQ86V59 439 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 CIR1Q86X95 450 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 OR8H2Q8N162 312 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 CHCHD4Q8N4Q1 142 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 IL17REQ8NFR9 667 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 IGDCC4Q8TDY8 1250 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 DIO2Q92813 273 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 TOE1Q96GM8 510 aaKnown RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 TMEM169Q96HH4 297 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 CLIC6Q96NY7 704 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 CDK5RAP1Q96SZ6 601 aaKnown RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 PTPN18Q99952 460 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF747Q9BV97 191 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 SEZ6LQ9BYH1 1024 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 OSBPL5Q9H0X9 879 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 VPS11Q9H270 941 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 NLRC4Q9NPP4 1024 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 ANLNQ9NQW6 1124 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 FNIP2Q9P278 1114 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 TMEFF2Q9UIK5 374 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 ACAD8Q9UKU7 415 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 DMTF1Q9Y222 760 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 COA3Q9Y2R0 106 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 LUC7L2Q9Y383 392 aaKnown RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 WASHC2AQ641Q2 1341 aa5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 FRMPD2Q68DX3 1309 aaPredicted RBP5.12□□□□□ -1.59
SMARCA5-202ENST00000508573 F5H423 210 aaPredicted RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 J3KRW8 73 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 CYR61O00622 381 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 HGSO14964 777 aaPredicted RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 GPR42O15529 346 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 MYO1BO43795 1136 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 FZD7O75084 574 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 FBXO21O94952 628 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 HSP90AB1P08238 724 aaKnown RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 SETSIPP0DME0 302 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 NAT2P11245 290 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 SLC5A1P13866 664 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 ACVRL1P37023 503 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 TSPAN7P41732 249 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 ECI1P42126 302 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 CYP4F3Q08477 520 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 NEXNQ0ZGT2 675 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 TBX2Q13207 712 aaPredicted RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 ATP13A4Q4VNC1 1196 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 ZC3H12BQ5HYM0 836 aaKnown RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 GPR158Q5T848 1215 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 CRIP3Q6Q6R5 217 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 LDHAL6AQ6ZMR3 332 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 USP51Q70EK9 711 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 OTOP3Q7RTS5 596 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 SRLQ86TD4 932 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 SPATS2Q86XZ4 545 aaKnown RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 RIOX2Q8IUF8 465 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 TRIM59Q8IWR1 403 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 KBTBD2Q8IY47 623 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 ARRDC4Q8NCT1 418 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 NPLOC4Q8TAT6 608 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 POF1BQ8WVV4 589 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 GOLGA1Q92805 767 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 ZNF622Q969S3 477 aaKnown RBP eCLIP5.11□□□□□ -1.591e-7■■□□□ 12.1
SMARCA5-202ENST00000508573 TBC1D20Q96BZ9 403 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 EXOC2Q96KP1 924 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 MRGPRX3Q96LB0 322 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 YTHDC1Q96MU7 727 aaKnown RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 MYCBPQ99417 103 aaPredicted RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 DHRS4Q9BTZ2 278 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 NAA15Q9BXJ9 866 aaKnown RBP5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 SLC12A5Q9H2X9 1139 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 NKX2-4Q9H2Z4 354 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 TCF7L1Q9HCS4 588 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 SH3BP1Q9Y3L3 701 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 HS3ST3A1Q9Y663 406 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 X6R8D5 127 aa5.11□□□□□ -1.59
SMARCA5-202ENST00000508573 CYP7B1O75881 506 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 U2AF1L5P0DN76 240 aaPredicted RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 LPOP22079 712 aaPredicted RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 ATICP31939 592 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 ALDH5A1P51649 535 aaPredicted RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 U2AF1Q01081 240 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 PDE1CQ14123 709 aaPredicted RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 PTPN21Q16825 1174 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 ARHGAP29Q52LW3 1261 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 TTLL5Q6EMB2 1281 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 PKN3Q6P5Z2 889 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 RSRC2Q7L4I2 434 aaKnown RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 FAM186BQ8IYM0 893 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 BTN2A2Q8WVV5 523 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 MBD6Q96DN6 1003 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 CLIP3Q96DZ5 547 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 PAWRQ96IZ0 340 aaKnown RBP5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 CDK5RAP3Q96JB5 506 aa5.1□□□□□ -1.59
SMARCA5-202ENST00000508573 TBATAQ96M53 351 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms