RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 GYS2P54840 703 aa7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 PRKD1Q15139 912 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 GCDHQ92947 438 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 USP36Q9P275 1121 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 MSRAQ9UJ68 235 aa7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 RBM8AQ9Y5S9 174 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 A0A0A6YYK5 440 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 LCHNA4D1U4 455 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 FKBP9O95302 570 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 IL2P60568 153 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 OCRLQ01968 901 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 TCIRG1Q13488 830 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 GRM7Q14831 915 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 SART3Q15020 963 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 TERF2Q15554 542 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 ZBTB41Q5SVQ8 909 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 FKBP9P1Q75LS8 142 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 ZNF610Q8N9Z0 462 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 LEO1Q8WVC0 666 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 GPHA2Q96T91 129 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 SOX7Q9BT81 388 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 MAPRE3Q9UPY8 281 aa7.6□□□□□ -1.19
TOPBP1-206ENST00000508524 HNRNPLP14866 589 aaKnown RBP eCLIP7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 BPIFB4P59827 614 aa7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 ADGRE4PQ86SQ3 457 aa7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 RNF180Q86T96 592 aa7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 ZNF808Q8N4W9 903 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 RPL10LQ96L21 214 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 EMC7Q9NPA0 242 aa7.59□□□□□ -1.19
TOPBP1-206ENST00000508524 ESPNLQ6ZVH7 1005 aa7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 THNSL2Q86YJ6 484 aa7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 ANKRD53Q8N9V6 530 aa7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 PLA2G15Q8NCC3 412 aa7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 TMEM176AQ96HP8 235 aa7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 NOL10Q9BSC4 688 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 TMA7Q9Y2S6 64 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-206ENST00000508524 MYPNQ86TC9 1320 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 A0A1W2PRX2 142 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 MAFGO15525 162 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 TOX4O94842 621 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 PCDH8O95206 1070 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 PFKMP08237 780 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 BPIP17213 487 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 LSP1P33241 339 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 ZXDAP98168 799 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 SDE2Q6IQ49 451 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 PPP1R14CQ8TAE6 165 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 OSBPL6Q9BZF3 934 aa7.57□□□□□ -1.2
TOPBP1-206ENST00000508524 HSD3B2P26439 372 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 DHCR24Q15392 516 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 CRIP3Q6Q6R5 217 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 C11orf74Q86VG3 221 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 Q8N1X5 172 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 FERMT2Q96AC1 680 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 HIST1H2AHQ96KK5 128 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 HIST1H2AJQ99878 128 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 ZNF747Q9BV97 191 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 TLR9Q9NR96 1032 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 SYNPO2Q9UMS6 1093 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 PCDHB6Q9Y5E3 794 aa7.56□□□□□ -1.2
TOPBP1-206ENST00000508524 PLSCR1O15162 318 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 VSIG10L2P0DP72 767 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 TAF7LQ5H9L4 462 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 BROXQ5VW32 411 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 SPTY2D1Q68D10 685 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 RNF207Q6ZRF8 634 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 GAREM2Q75VX8 874 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 CXorf67Q86X51 503 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 SLC5A5Q92911 643 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 IL23AQ9NPF7 189 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 HECAQ9UBI9 543 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 SH3BP1Q9Y3L3 701 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 PPP2R3BQ9Y5P8 575 aa7.55□□□□□ -1.2
TOPBP1-206ENST00000508524 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 PRSS38A1L453 326 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 GAAP10253 952 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 TACR2P21452 398 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 MANFP55145 182 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 DDB1Q16531 1140 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 USP39Q53GS9 565 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 CDYL2Q8N8U2 506 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 EXTL1Q92935 676 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 MPHOSPH9Q99550 1183 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 VPS11Q9H270 941 aa7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 C14orf93Q9H972 538 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-206ENST00000508524 UBE2QL1A1L167 161 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 GOLGA8BA8MQT2 603 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 NEMP1O14524 444 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 DAPK3O43293 454 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 MTSS1O43312 755 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 KDM1AO60341 852 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 SEC24DO94855 1032 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 AMHP03971 560 aa7.53□□□□□ -1.2
TOPBP1-206ENST00000508524 JUNP05412 331 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms