RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ZNF558Q96NG5 402 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC94Q9BW85 323 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MOSPD1Q9UJG1 213 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PPP1R9AQ9ULJ8 1098 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SNCAIPQ9Y6H5 919 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 RFX7Q2KHR2 1363 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PI4K2BG5E9Z4 385 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 hCG_1984214I3L0E3 225 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PFDN6O15212 129 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ALDH2P05091 517 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SETSIPP0DME0 302 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MYL4P12829 197 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CIITAP33076 1130 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 STAT5BP51692 787 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 KIF11P52732 1056 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 HIRAP54198 1017 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 C21orf59P57076 290 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 YWHAEP62258 255 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 RAD51AP2Q09MP3 1159 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF771Q7L3S4 317 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ATG9AQ7Z3C6 839 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF713Q8N859 430 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SHDQ96IW2 340 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CFAP57Q96MR6 1250 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF830Q96NB3 372 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TAAR1Q96RJ0 339 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 C2orf40Q9H1Z8 148 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 RMND1Q9NWS8 449 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CPSF3Q9UKF6 684 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TRAF3IP3Q9Y228 551 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SH3BP1Q9Y3L3 701 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PASKQ96RG2 1323 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PRPF40AO75400 957 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 YEATS4O95619 227 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ASGR1P07306 291 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SMIM10L2AP0DMW4 78 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SMIM10L2BP0DMW5 78 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 RPS6KB1P23443 525 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MRPS6P82932 125 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 AMPD2Q01433 879 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PPP1R15BQ5SWA1 713 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TTBK2Q6IQ55 1244 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 DHX32Q7L7V1 743 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SCN4BQ8IWT1 228 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 BLIDQ8IZY5 108 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SNX29Q8TEQ0 813 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MYLIPQ8WY64 445 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 KIFAP3Q92845 792 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 LENG1Q96BZ8 264 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CPB2Q96IY4 423 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 FTHL17Q9BXU8 183 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MRPL9Q9BYD2 267 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PANK2Q9BZ23 570 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 GTPBP4Q9BZE4 634 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 IRF2BPLQ9H1B7 796 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 POLR3FQ9H1D9 316 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SLC12A6Q9UHW9 1150 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TUBE1Q9UJT0 475 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PCDHA12Q9UN75 941 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ITM2BQ9Y287 266 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MYH7BA7E2Y1 1941 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 A0A1W2PRG0 241 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 C9IYK1 514 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 NPTXRO95502 500 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 FGAP02671 866 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 S100BP04271 92 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CD19P15391 556 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 DNAJA1P31689 397 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 KRT9P35527 623 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PDE6CP51160 858 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ASIC1P78348 528 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PPP2R5CQ13362 524 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 C12orf60Q5U649 245 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ZC3H14Q6PJT7 736 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CLEC10AQ8IUN9 316 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 FMNL3Q8IVF7 1028 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC50Q8IVM0 306 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 POMGNT1Q8WZA1 660 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 BRF1Q92994 677 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MAML3Q96JK9 1138 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ESYT1Q9BSJ8 1104 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TSEN34Q9BSV6 310 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 EHD4Q9H223 541 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 FAM204AQ9H8W3 233 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SETD4Q9NVD3 440 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 KIF5CO60282 957 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 GJB2P29033 226 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SFNP31947 248 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 ATP6V1E1P36543 226 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 NNMTP40261 264 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 MAGEA10P43363 369 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 OAZ1P54368 228 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PTH1RQ03431 593 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 AMHR2Q16671 573 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 PUS10Q3MIT2 529 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 DCAF17Q5H9S7 520 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 GALNT17Q6IS24 598 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 BBS5Q8N3I7 341 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SH2B1Q9NRF2 756 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms