RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 C7orf25Q9BPX7 421 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 GCOM2Q9BZD3 368 aaPredicted RBP11.34□□□□□ -0.59
HTT-204ENST00000508321 OLFML3Q9NRN5 406 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 LMBRD1Q9NUN5 540 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
HTT-204ENST00000508321 SCN5AQ14524 2016 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 MICAL3Q7RTP6 2002 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 A0A087WWV3 80 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 PVALEFA0A1B0GWK0 134 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 GADD45BO75293 160 aaPredicted RBP11.33□□□□□ -0.6
HTT-204ENST00000508321 GPR32O75388 356 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 VTNP04004 478 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 CTSHP09668 335 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 GLRA2P23416 452 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 EIF4BP23588 611 aaKnown RBP11.33□□□□□ -0.6
HTT-204ENST00000508321 SMTNP53814 917 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 NLRP11P59045 1033 aaKnown RBP11.33□□□□□ -0.6
HTT-204ENST00000508321 ASIC1P78348 528 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.6
HTT-204ENST00000508321 DRP2Q13474 957 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 CAPSQ13938 189 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 GIT2Q14161 759 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 DHX8Q14562 1220 aaKnown RBP11.33□□□□□ -0.6
HTT-204ENST00000508321 LONRF3Q496Y0 759 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 ARSHQ5FYA8 562 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 TSHZ1Q6ZSZ6 1077 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 SRGAP1Q7Z6B7 1085 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 RNF149Q8NC42 400 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 DEPTORQ8TB45 409 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 ZBTB10Q96DT7 871 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 PAGE5Q96GU1 130 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 NLRP4Q96MN2 994 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
HTT-204ENST00000508321 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 WNT8AQ9H1J5 351 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 ADAMTS10Q9H324 1103 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
HTT-204ENST00000508321 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 MYMKA6NI61 221 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 NR1I2O75469 434 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 CHRNA1P02708 482 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 CXCL10P02778 98 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
HTT-204ENST00000508321 LIG1P18858 919 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 MCM4P33991 863 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 PTENP60484 403 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 POSTNQ15063 836 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 KIZQ2M2Z5 673 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 FBXO47Q5MNV8 452 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 STXBP4Q6ZWJ1 553 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
HTT-204ENST00000508321 DAW1Q8N136 415 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
HTT-204ENST00000508321 HVCN1Q96D96 273 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 DNAJC19Q96DA6 116 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 OSMRQ99650 979 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
HTT-204ENST00000508321 ST6GALNAC4Q9H4F1 302 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 GPRC5CQ9NQ84 441 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 RMND1Q9NWS8 449 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 ARHGAP28Q9P2N2 729 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 UBE4BO95155 1302 aa11.32□□□□□ -0.6
HTT-204ENST00000508321 A0A087WZ62 844 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 GPR182O15218 404 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 EFCAB14O75071 495 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 ERLIN2O94905 339 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 SMC2O95347 1197 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 IDEP14735 1019 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 CYP2C18P33260 490 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 NPTX2P47972 431 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 FPGSQ05932 587 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 COASYQ13057 564 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 PAK2Q13177 524 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 KCNB1Q14721 858 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
HTT-204ENST00000508321 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
HTT-204ENST00000508321 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 MAEAQ7L5Y9 396 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 DYMQ7RTS9 669 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 FAM178BQ8IXR5 827 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 MYCT1Q8N699 235 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 SEPT8Q92599 483 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 CCDC51Q96ER9 411 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 FDXACB1Q9BRP7 624 aaPredicted RBP11.31□□□□□ -0.6
HTT-204ENST00000508321 NTPCRQ9BSD7 190 aaKnown RBP11.31□□□□□ -0.6
HTT-204ENST00000508321 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 IFT122Q9HBG6 1241 aa11.31□□□□□ -0.6
HTT-204ENST00000508321 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms