RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FAM228AQ86W67 206 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 KSR1Q8IVT5 923 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 HERC6Q8IVU3 1022 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
RNF4-210ENST00000508235 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 NFKBIZQ9BYH8 718 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 SCAND2PQ9GZW5 306 aaPredicted RBP16.63■□□□□ 0.25
RNF4-210ENST00000508235 IFT122Q9HBG6 1241 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 C1orf112Q9NSG2 853 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 KCNG1Q9UIX4 513 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 MSRAQ9UJ68 235 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
RNF4-210ENST00000508235 CIZ1Q9ULV3 898 aaPredicted RBP16.63■□□□□ 0.25
RNF4-210ENST00000508235 MYH11P35749 1972 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 GLRA2P23416 452 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 RRAGBQ5VZM2 374 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.62■□□□□ 0.25
RNF4-210ENST00000508235 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
RNF4-210ENST00000508235 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 ZBED2Q9BTP6 218 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 C2orf40Q9H1Z8 148 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
RNF4-210ENST00000508235 C17orf75Q9HAS0 396 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
RNF4-210ENST00000508235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.61■□□□□ 0.25
RNF4-210ENST00000508235 ENPP3O14638 875 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 ERLIN2O94905 339 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 STAG3L1P0CL83 205 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 GUCY2CP25092 1073 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 NAMPTP43490 491 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 FXR1P51114 621 aaKnown RBP eCLIP16.61■□□□□ 0.25
RNF4-210ENST00000508235 SLC12A3P55017 1021 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 PTENP60484 403 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 DEFB103AP81534 67 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
RNF4-210ENST00000508235 CAPSQ13938 189 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 USP49Q70CQ1 688 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 ZBTB8OSQ8IWT0 167 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 LARP4BQ92615 738 aaKnown RBP16.61■□□□□ 0.25
RNF4-210ENST00000508235 RAD54LQ92698 747 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 TMX1Q9H3N1 280 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 RGS18Q9NS28 235 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 FAM13BQ9NYF5 915 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 TRIOBPQ9H2D6 2365 aa16.61■□□□□ 0.25
RNF4-210ENST00000508235 TTC3P53804 2025 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 TMEM265A0A087WTH1 108 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 GRXCR1A8MXD5 290 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
RNF4-210ENST00000508235 GJB5O95377 273 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 DNAJB2P25686 324 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 STAT6P42226 847 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 FAM109BQ6ICB4 259 aaPredicted RBP16.6■□□□□ 0.25
RNF4-210ENST00000508235 SLC24A5Q71RS6 500 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 DEPTORQ8TB45 409 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 ADAM2Q99965 735 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
RNF4-210ENST00000508235 RUSC1Q9BVN2 902 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 PBX4Q9BYU1 374 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 BLOC1S4Q9NUP1 217 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 PCDHA7Q9UN72 937 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
RNF4-210ENST00000508235 INO80B-WBP1J3KQ70 363 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 TLL1O43897 1013 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 HIP1RO75146 1068 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 SKIP12755 728 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 AXLP30530 894 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 SARSP49591 514 aaKnown RBP16.59■□□□□ 0.25
RNF4-210ENST00000508235 DMP1Q13316 513 aaPredicted RBP16.59■□□□□ 0.25
RNF4-210ENST00000508235 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
RNF4-210ENST00000508235 GPBP1Q86WP2 473 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 NPAS4Q8IUM7 802 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 LEO1Q8WVC0 666 aaPredicted RBP16.59■□□□□ 0.25
RNF4-210ENST00000508235 TIFAQ96CG3 184 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 LRCH3Q96II8 777 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 RAD9AQ99638 391 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 LRFN2Q9ULH4 789 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 ODF2LQ9ULJ1 636 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
RNF4-210ENST00000508235 CSDE1O75534 798 aaKnown RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 KRT18P05783 430 aaKnown RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 FGFR4P22455 802 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 EFNA5P52803 228 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 RABGGTBP53611 331 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 MCM6Q14566 821 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 DSC3Q14574 896 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 ZNF697Q5TEC3 545 aa16.58■□□□□ 0.24
RNF4-210ENST00000508235 CDCA2Q69YH5 1023 aaPredicted RBP16.58■□□□□ 0.24
RNF4-210ENST00000508235 ADALQ6DHV7 355 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms