RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NR1I2O75469 434 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 SMC2O95347 1197 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 CTSHP09668 335 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 IQCF3P0C7M6 154 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 SRGAP2CP0DJJ0 459 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 EFNA5P52803 228 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 RAD51AP2Q09MP3 1159 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 MKRN4PQ13434 485 aaPredicted RBP22.19■■□□□ 1.14
USP53-203ENST00000507597 SRGAP1Q7Z6B7 1085 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 MYCT1Q8N699 235 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 NFKBIZQ9BYH8 718 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 GTPBP4Q9BZE4 634 aaKnown RBP22.19■■□□□ 1.14
USP53-203ENST00000507597 DACT1Q9NYF0 836 aa22.19■■□□□ 1.14
USP53-203ENST00000507597 TRIM43BA6NCK2 446 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 LRRIQ4A6NIV6 560 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 CCDC169A6NNP5 214 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 GPR182O15218 404 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 GPR32O75388 356 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 PFKMP08237 780 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 LIG1P18858 919 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 GLRA2P23416 452 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 EIF4BP23588 611 aaKnown RBP22.18■■□□□ 1.14
USP53-203ENST00000507597 TMEM62Q0P6H9 643 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 PPIGQ13427 754 aaKnown RBP eCLIP22.18■■□□□ 1.14
USP53-203ENST00000507597 DRP2Q13474 957 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 KIZQ2M2Z5 673 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 STXBP4Q6ZWJ1 553 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 LRRC15Q8TF66 581 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 SPIRE2Q8WWL2 714 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 TRIM43Q96BQ3 446 aaPredicted RBP22.18■■□□□ 1.14
USP53-203ENST00000507597 GPRC5CQ9NQ84 441 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 KMT5AQ9NQR1 393 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 PANK4Q9NVE7 773 aa22.18■■□□□ 1.14
USP53-203ENST00000507597 MAPTP10636 758 aaKnown RBP22.17■■□□□ 1.14
USP53-203ENST00000507597 SFPQP23246 707 aaKnown RBP eCLIP22.17■■□□□ 1.14
USP53-203ENST00000507597 CYP2C18P33260 490 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 ZNF131P52739 623 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 PEX3P56589 373 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 MLLT1Q03111 559 aaPredicted RBP22.17■■□□□ 1.14
USP53-203ENST00000507597 MGAT3Q09327 533 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 POSTNQ15063 836 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 HERC4Q5GLZ8 1057 aaPredicted RBP22.17■■□□□ 1.14
USP53-203ENST00000507597 UNC13DQ70J99 1090 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 SH3RF1Q7Z6J0 888 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 FAM178BQ8IXR5 827 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 STAMQ92783 540 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 WNT8BQ93098 351 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 NTPCRQ9BSD7 190 aaKnown RBP22.17■■□□□ 1.14
USP53-203ENST00000507597 RMND1Q9NWS8 449 aa22.17■■□□□ 1.14
USP53-203ENST00000507597 BRCA2P51587 3418 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 ARID2Q68CP9 1835 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 A0A087WZ62 844 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 TRAK2O60296 914 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 RPS6KA5O75582 802 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 CHRNA1P02708 482 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 CCL23P55773 120 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 ALCAMQ13740 583 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 TSHZ1Q6ZSZ6 1077 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 IFNLR1Q8IU57 520 aaPredicted RBP22.16■■□□□ 1.14
USP53-203ENST00000507597 ASAP3Q8TDY4 903 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 APBB2Q92870 758 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 DNAJC19Q96DA6 116 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 OSMRQ99650 979 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 FDXACB1Q9BRP7 624 aaPredicted RBP22.16■■□□□ 1.14
USP53-203ENST00000507597 ADAMTS10Q9H324 1103 aa22.16■■□□□ 1.14
USP53-203ENST00000507597 TRIP12Q14669 1992 aaPredicted RBP22.16■■□□□ 1.14
USP53-203ENST00000507597 NPHP3-ACAD11A0A0J9YXS1 232 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 DARSP14868 501 aaKnown RBP22.15■■□□□ 1.14
USP53-203ENST00000507597 PTENP60484 403 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 PSMD2Q13200 908 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 CAPSQ13938 189 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 SEPT8Q92599 483 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 EXOC1Q9NV70 894 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 PCDHB13Q9Y5F0 798 aa22.15■■□□□ 1.14
USP53-203ENST00000507597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 SFI1A8K8P3 1242 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 K7ERI5 159 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 ERLIN2O94905 339 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 KIF20AO95235 890 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 ACTN1P12814 892 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 NPTX2P47972 431 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 CACNB1Q02641 598 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 FPGSQ05932 587 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 STRN3Q13033 797 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 MAPK7Q13164 816 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 PAK2Q13177 524 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 MAPK6Q16659 721 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 SKOR2Q2VWA4 1001 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 FBXO47Q5MNV8 452 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 KSR1Q8IVT5 923 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 DAW1Q8N136 415 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 SYAP1Q96A49 352 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 PPP1R16BQ96T49 567 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 FTHL17Q9BXU8 183 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 TMEM134Q9H6X4 195 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 OLFML3Q9NRN5 406 aa22.14■■□□□ 1.13
USP53-203ENST00000507597 PRMT7Q9NVM4 692 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 RNF216Q9NWF9 866 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 ZMYND8Q9ULU4 1186 aaPredicted RBP22.14■■□□□ 1.13
USP53-203ENST00000507597 EVPLQ92817 2033 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms