RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 HAS1Q92839 578 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 PPP2R3CQ969Q6 453 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 CASD1Q96PB1 797 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 NIFKQ9BYG3 293 aaKnown RBP14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 TMEM117Q9H0C3 514 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 CWH43Q9H720 699 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 CYP26B1Q9NR63 512 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 TLR9Q9NR96 1032 aa14.37□□□□□ -0.11
GPATCH4-211ENST00000506832 A0A087WWV3 80 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 BAG4O95429 457 aaKnown RBP14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 SRGAP2CP0DJJ0 459 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 LAG3P18627 525 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 SFPQP23246 707 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 ERVFC1P60507 584 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 CALCRLQ16602 461 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 XKR9Q5GH70 373 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 LRRC55Q6ZSA7 311 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 SLC7A3Q8WY07 619 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 FAM20AQ96MK3 541 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 ZNF558Q96NG5 402 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 CEP89Q96ST8 783 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 TLE6Q9H808 572 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 CD207Q9UJ71 328 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 SPTBN5Q9NRC6 3674 aaKnown RBP14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 BRWD1Q9NSI6 2320 aa14.36□□□□□ -0.11
GPATCH4-211ENST00000506832 MEIS3P2A8K0S8 358 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 MBTPS2O43462 519 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 ZC3H11AO75152 810 aaKnown RBP eCLIP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 MAFO75444 373 aaPredicted RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 ATF7P17544 494 aaPredicted RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 SP100P23497 879 aaPredicted RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 YWHABP31946 246 aaKnown RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 TXKP42681 527 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 EMC2Q15006 297 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 KCNT2Q6UVM3 1135 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 NAP1L4Q99733 375 aaKnown RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 TCF25Q9BQ70 676 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 ELAC1Q9H777 363 aaKnown RBP14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 FAM50BQ9Y247 325 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 COL4A3BPQ9Y5P4 624 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 TTC28Q96AY4 2481 aa14.35□□□□□ -0.11
GPATCH4-211ENST00000506832 TRANK1O15050 2925 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 POTEMA6NI47 508 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 HOXA2O43364 376 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 NEMFO60524 1076 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 GLP2RO95838 553 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 P4HBP07237 508 aaKnown RBP14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 MCM7P33993 719 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 EPHA7Q15375 998 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 PUS10Q3MIT2 529 aaKnown RBP14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 NAALADL2Q58DX5 795 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 TMEM31Q5JXX7 168 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 ERICH6BQ5W0A0 696 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 MAEAQ7L5Y9 396 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 SLFN12Q8IYM2 578 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 TNFRSF25Q93038 417 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 EIF2AK1Q9BQI3 630 aaKnown RBP14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 DACT1Q9NYF0 836 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 ARID2Q68CP9 1835 aa14.34□□□□□ -0.11
GPATCH4-211ENST00000506832 IGKV6-21A0A0C4DH24 114 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 DKC1O60832 514 aaKnown RBP eCLIP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 FAM189BP81408 668 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 RNASELQ05823 741 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 ZP2Q05996 745 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 ADAM15Q13444 863 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 SMAD4Q13485 552 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 CTC1Q2NKJ3 1217 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 ZNF410Q86VK4 478 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 RNF149Q8NC42 400 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 PRPF31Q8WWY3 499 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 PSPC1Q8WXF1 523 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 MRPS27Q92552 414 aaKnown RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 MTRQ99707 1265 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 JPH2Q9BR39 696 aaPredicted RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 LRFN3Q9BTN0 628 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 APOL6Q9BWW8 343 aa14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
GPATCH4-211ENST00000506832 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 TBX3O15119 743 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 NCK2O43639 380 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 USO1O60763 962 aaKnown RBP14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 PHKA2P46019 1235 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 SPIRE1Q08AE8 756 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 LAMTOR4Q0VGL1 99 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 COL19A1Q14993 1142 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 EFHBQ8N7U6 833 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 PIGOQ8TEQ8 1089 aa14.32□□□□□ -0.12
GPATCH4-211ENST00000506832 AUTS2Q8WXX7 1259 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms