RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 CYP2C8P10632 490 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ZKSCAN1P17029 563 aaPredicted RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ATP4AP20648 1035 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 PTMSP20962 102 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ITPKAP23677 461 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 MCM5P33992 734 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 LIFRP42702 1097 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 PTPN5P54829 565 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 EVCP57679 992 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TROAPQ12815 778 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TRDNQ13061 729 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 KRT32Q14532 448 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 COG2Q14746 738 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 STAT4Q14765 748 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ZYXQ15942 572 aaKnown RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 ACBD5Q5T8D3 534 aaPredicted RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 SLFN13Q68D06 897 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 BTNL9Q6UXG8 535 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 GADL1Q6ZQY3 521 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 DHX32Q7L7V1 743 aaKnown RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 CHST3Q7LGC8 479 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 IQCA1Q86XH1 822 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 REPS2Q8NFH8 660 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 OR13H1Q8NG92 308 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 SLC7A3Q8WY07 619 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 DDX1Q92499 740 aaKnown RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TMEM87BQ96K49 555 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 IPO9Q96P70 1041 aaKnown RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TRIM8Q9BZR9 551 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 RPAP3Q9H6T3 665 aaPredicted RBP5.64□□□□□ -1.51
CPNE4-207ENST00000506687 SH2D4AQ9H788 454 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 LY9Q9HBG7 655 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TXNRD2Q9NNW7 524 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TOMM22Q9NS69 142 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TMEM39AQ9NV64 488 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 OBP2AQ9NY56 170 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TMOD4Q9NZQ9 345 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 RBPJLQ9UBG7 517 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TRHDEQ9UKU6 1024 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 COG5Q9UP83 839 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 SAMM50Q9Y512 469 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 TNKSO95271 1327 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 SMCHD1A6NHR9 2005 aa5.64□□□□□ -1.51
CPNE4-207ENST00000506687 A0A096LPE4 126 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 A0A1W2PPZ6 126 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 RNF223E7ERA6 249 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 SH2B2O14492 632 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 IFIT3O14879 490 aaKnown RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 GPR39O43194 453 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PEX10O60683 326 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 ATE1O95260 518 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PDHBP11177 359 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 BMP3P12645 472 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 CPA1P15085 419 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 BMP6P22004 513 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 MCCP23508 829 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 TARSP26639 723 aaKnown RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 NEK4P51957 841 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 RTP1P59025 263 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 HERVK_113P62684 666 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PURAQ00577 322 aaKnown RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 ZNF543Q08ER8 600 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PCBP1Q15365 356 aaKnown RBP eCLIP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 TMEM95Q3KNT9 176 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 FAM83BQ5T0W9 1011 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 MAP3K21Q5TCX8 1036 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 KIAA1211LQ6NV74 962 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 RASGRP2Q7LDG7 609 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 SGMS1Q86VZ5 419 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PPM1KQ8N3J5 372 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 ASAP3Q8TDY4 903 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 DCAF4Q8WV16 495 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 MFSD14AQ96MC6 490 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 HHIPQ96QV1 700 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 MAP3K14Q99558 947 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 NUP88Q99567 741 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 UBAC1Q9BSL1 405 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 SENP6Q9GZR1 1112 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 ALDH8A1Q9H2A2 487 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 FBRSQ9HAH7 460 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 CBX8Q9HC52 389 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PRDM5Q9NQX1 630 aaPredicted RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 FBXO28Q9NVF7 368 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 INTS7Q9NVH2 962 aaKnown RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 HOXC10Q9NYD6 342 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 BTBD7Q9P203 1132 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 MORF4L1Q9UBU8 362 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 IP6K2Q9UHH9 426 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 PPP1R9AQ9ULJ8 1098 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 STX8Q9UNK0 236 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 CYP8B1Q9UNU6 501 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 SLC12A7Q9Y666 1083 aa5.63□□□□□ -1.51
CPNE4-207ENST00000506687 BAZ2BQ9UIF8 2168 aaKnown RBP5.63□□□□□ -1.51
CPNE4-207ENST00000506687 TRBV23-1A0A0A0MS06 115 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 VWA5AO00534 786 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 GABRDO14764 452 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 ATP2A1O14983 1001 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 RFPL1O75677 317 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 CD2BP2O95400 341 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms