RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LRG1P02750 347 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 PFKMP08237 780 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 MC4RP32245 332 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 RGS3P49796 1198 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 GALK1P51570 392 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 USP14P54578 494 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 GALEQ14376 348 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 NOLC1Q14978 699 aaKnown RBP eCLIP4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 PGS1Q32NB8 556 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF648Q5T619 568 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 CD276Q5ZPR3 534 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 CYB5RLQ6IPT4 315 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 TSHZ1Q6ZSZ6 1077 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 MIB1Q86YT6 1006 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 TP53INP2Q8IXH6 220 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM126BQ8IXS8 530 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 PRR18Q8N4B5 295 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 CAMKK1Q8N5S9 505 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZBTB34Q8NCN2 500 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 WDR48Q8TAF3 677 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 ABHD4Q8TB40 342 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 MVB12AQ96EY5 273 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 DDX11Q96FC9 970 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 STRBPQ96SI9 672 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 SLC39A2Q9NP94 309 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 INCENPQ9NQS7 918 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 MBNL3Q9NUK0 354 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 GALNT8Q9NY28 637 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 PRSS50Q9UI38 385 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 DENND2AQ9ULE3 1009 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 USP18Q9UMW8 372 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 CTNND2Q9UQB3 1225 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 YBX2Q9Y2T7 364 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 DNMBPQ6XZF7 1577 aa4.06□□□□□ -1.76
TRAPPC11-205ENST00000506426 ARAP1Q96P48 1450 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 TDRD9Q8NDG6 1382 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF839A8K0R7 811 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 H3BML4 177 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 PMM2O15305 246 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 PCDH8O95206 1070 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 MPIG6BO95866 241 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZBED1O96006 694 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 HRGP04196 525 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 MYBP10242 640 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 RHCEP18577 417 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 XPAP23025 273 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 APEX1P27695 318 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ECE1P42892 770 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 AFMP43652 599 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 HTR3AP46098 478 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 MAPKAPK2P49137 400 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 GPR15P49685 360 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 NKX3-2P78367 333 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 RHDQ02161 417 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 PPARAQ07869 468 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 TRIM25Q14258 630 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 CCDC178Q5BJE1 867 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZC3H14Q6PJT7 736 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 TEPPQ6URK8 271 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 RPTNQ6XPR3 784 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ETV3LQ6ZN32 361 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 CBLL1Q75N03 491 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 AMIGO3Q86WK7 504 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 LYSMD2Q8IV50 215 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 DENND1CQ8IV53 801 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 SLC41A1Q8IVJ1 513 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 POU5F2Q8N7G0 328 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 CDYL2Q8N8U2 506 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 IGDCC4Q8TDY8 1250 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 TSPEARQ8WU66 669 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 GAB3Q8WWW8 586 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 IL17RAQ96F46 866 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 TNIP3Q96KP6 325 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ARPC5LQ9BPX5 153 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ELAC2Q9BQ52 826 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 RNF32Q9H0A6 362 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 PRDM12Q9H4Q4 367 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 FTSJ1Q9UET6 329 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 SERPINB13Q9UIV8 391 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 ADAMTS6Q9UKP5 1117 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 CDY2AQ9Y6F7 541 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 SNAPC4Q5SXM2 1469 aa4.05□□□□□ -1.76
TRAPPC11-205ENST00000506426 TARBP1Q13395 1621 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 IFRD1O00458 451 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ABLIM1O14639 778 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 TPP1O14773 563 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 CREB3O43889 395 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 NRP2O60462 931 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 TUSC2O75896 110 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 RNASE1P07998 156 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 SDHBP21912 280 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 STAT5AP42229 794 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 WASP42768 502 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 AK2P54819 239 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF280AP59817 542 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 CCT2P78371 535 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 PFKPQ01813 784 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 NFATC3Q12968 1075 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 MALLQ13021 153 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms