RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SIK3Q9Y2K2 1263 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 POTEMA6NI47 508 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 GABRDO14764 452 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 ZBTB5O15062 677 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 CYP3A4P08684 503 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 PLCG1P19174 1290 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 TERF1P54274 439 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 MRPS9P82933 396 aaKnown RBP6.59□□□□□ -1.35
SCLT1-207ENST00000506233 APBA1Q02410 837 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 TCP10Q12799 353 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 RAPGEF1Q13905 1077 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 ANKRD40Q6AI12 368 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 CCAR2Q8N163 923 aaKnown RBP6.59□□□□□ -1.35
SCLT1-207ENST00000506233 BICD2Q8TD16 824 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 FBXO41Q8TF61 875 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 CNKSR1Q969H4 720 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 HSH2DQ96JZ2 352 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 SYT11Q9BT88 431 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 ABCB6Q9NP58 842 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 NPHP3-ACAD11A0A0J9YXS1 232 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 SMCO2A6NFE2 343 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 ENC1O14682 589 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 PEX10O60683 326 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 MICAL2O94851 1124 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 SLC3A2P08195 630 aaKnown RBP6.59□□□□□ -1.35
SCLT1-207ENST00000506233 FSHRP23945 695 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 CLCQ05315 142 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 COL9A2Q14055 689 aaPredicted RBP6.59□□□□□ -1.35
SCLT1-207ENST00000506233 KCNB1Q14721 858 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 PPP2R5EQ16537 467 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 C1orf220Q5T0J3 134 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 CENPPQ6IPU0 288 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 IQCA1Q86XH1 822 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 FERMT2Q96AC1 680 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 EXOC2Q96KP1 924 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 HSD17B14Q9BPX1 270 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 SALL4Q9UJQ4 1053 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 SYNPO2Q9UMS6 1093 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 RIPK3Q9Y572 518 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 PRUNE2Q8WUY3 3088 aa6.59□□□□□ -1.35
SCLT1-207ENST00000506233 PRSS47A8MTI9 375 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 F5H6K3 240 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 TLR2O60603 784 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 GABBR2O75899 941 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 LDHCP07864 332 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 LONP1P36776 959 aaKnown RBP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 KLRC3Q07444 240 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 ITKQ08881 620 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 STK38Q15208 465 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 SNAP47Q5SQN1 464 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 TEKT1Q969V4 418 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 PPP1R13BQ96KQ4 1090 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 PAGR1Q9BTK6 254 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 VPS33BQ9H267 617 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 MCM8Q9UJA3 840 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 TFR2Q9UP52 801 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 TRIM75PA6NK02 468 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 PSMD10O75832 226 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 ITGB5P18084 799 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 STRN3Q13033 797 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 FAM102BQ5T8I3 360 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 FKBP1CQ5VVH2 108 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 HGSNATQ68CP4 663 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 VASH1Q7L8A9 365 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 PCGF5Q86SE9 256 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 TCEAL8Q8IYN2 117 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 ZSWIM2Q8NEG5 633 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 ATL2Q8NHH9 583 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 UBXN6Q9BZV1 441 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 FBXO28Q9NVF7 368 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 LUZP4Q9P127 313 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 PHACTR2O75167 634 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 BAG3O95817 575 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 EDN1P05305 212 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 YBX3P16989 372 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 ZSCAN20P17040 1043 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 SREBF1P36956 1147 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 CAP2P40123 477 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 JAKMIP3Q5VZ66 844 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 GK5Q6ZS86 529 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 DHX58Q96C10 678 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 GSDMAQ96QA5 445 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 SLC4A5Q9BY07 1137 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 IRX2Q9BZI1 471 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-207ENST00000506233 SUV39H2Q9H5I1 410 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 KAT14Q9H8E8 782 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 SIX2Q9NPC8 291 aa6.58□□□□□ -1.36
SCLT1-207ENST00000506233 CCDC196A0A1B0GTZ2 297 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 CDK2AP1O14519 115 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 CNMDO75829 334 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 RAD17O75943 681 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 GTF2E1P29083 439 aaPredicted RBP6.57□□□□□ -1.36
SCLT1-207ENST00000506233 GRM5P41594 1212 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 NCBP1Q09161 790 aaKnown RBP6.57□□□□□ -1.36
SCLT1-207ENST00000506233 KRT31Q15323 416 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 MEA1Q16626 185 aa6.57□□□□□ -1.36
SCLT1-207ENST00000506233 ASPRV1Q53RT3 343 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms