RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZMAT1Q5H9K5 638 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 TRIM68Q6AZZ1 485 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 LARP4Q71RC2 724 aaKnown RBP eCLIP7.69□□□□□ -1.184e-10■■■□□ 16.3
NIPBL-205ENST00000505998 PLEKHH3Q7Z736 793 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 CMIPQ8IY22 773 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 BCL6BQ8N143 479 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-205ENST00000505998 USP18Q9UMW8 372 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 PTPN22Q9Y2R2 807 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 PCDHB6Q9Y5E3 794 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 EEA1Q15075 1411 aa7.69□□□□□ -1.18
NIPBL-205ENST00000505998 MAGI1Q96QZ7 1491 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-205ENST00000505998 B4GALT3O60512 393 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 B4GALT4O60513 344 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 KATNA1O75449 491 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 MRE11P49959 708 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 SESN2P58004 480 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-205ENST00000505998 FZD5Q13467 585 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 FSCN1Q16658 493 aaKnown RBP7.68□□□□□ -1.18
NIPBL-205ENST00000505998 UGT8Q16880 541 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 KLHDC10Q6PID8 442 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 SPOCD1Q6ZMY3 1216 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 CDYL2Q8N8U2 506 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 LMBR1Q8WVP7 490 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 RSAD2Q8WXG1 361 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 EAF2Q96CJ1 260 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-205ENST00000505998 MTMR8Q96EF0 704 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 MENTQ9BUN1 341 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 KIAA1683Q9H0B3 1180 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 XYLT2Q9H1B5 865 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 FAM184BQ9ULE4 1060 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 VWA7Q9Y334 891 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 GAPVD1Q14C86 1478 aa7.68□□□□□ -1.18
NIPBL-205ENST00000505998 K7ESF4 209 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 H2AFYO75367 372 aaKnown RBP7.67□□□□□ -1.18
NIPBL-205ENST00000505998 LPLP06858 475 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 ENPP1P22413 925 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 ERVK-21P61565 698 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 MTMR1Q13613 665 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 PITRM1Q5JRX3 1037 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 FRMD5Q7Z6J6 570 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 RPUSD2Q8IZ73 545 aaKnown RBP7.67□□□□□ -1.18
NIPBL-205ENST00000505998 TGFBRAP1Q8WUH2 860 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 WDR92Q96MX6 357 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 PUS7Q96PZ0 661 aaKnown RBP7.67□□□□□ -1.18
NIPBL-205ENST00000505998 TRIM8Q9BZR9 551 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 DNAI1Q9UI46 699 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 INVSQ9Y283 1065 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 GRIN2BQ13224 1484 aa7.67□□□□□ -1.18
NIPBL-205ENST00000505998 INHBBP09529 407 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 XPAP23025 273 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-205ENST00000505998 CNR2P34972 360 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 PPARAQ07869 468 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 KLF1Q13351 362 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-205ENST00000505998 ZNF827Q17R98 1081 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 AGBL4Q5VU57 503 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 GAB3Q8WWW8 586 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 GFM2Q969S9 779 aaKnown RBP7.66□□□□□ -1.18
NIPBL-205ENST00000505998 OR10A2Q9H208 303 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 PRSS50Q9UI38 385 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 TMPRSS11EQ9UL52 423 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 EDARQ9UNE0 448 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 DUSP10Q9Y6W6 482 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 WASHC2CQ9Y4E1 1318 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 KIF27Q86VH2 1401 aa7.66□□□□□ -1.18
NIPBL-205ENST00000505998 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-205ENST00000505998 CHD1O14646 1710 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 NRP2O60462 931 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 KIF21BO75037 1637 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 GPR15P49685 360 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 ADAM15Q13444 863 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 SURF1Q15526 300 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.65□□□□□ -1.18
NIPBL-205ENST00000505998 SYDE2Q5VT97 1194 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 USP30Q70CQ3 517 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 OR14C36Q8NHC7 312 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 NKD2Q969F2 451 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-205ENST00000505998 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 ADAM7Q9H2U9 754 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 KCTD10Q9H3F6 313 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 TRHDEQ9UKU6 1024 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 SLC4A7Q9Y6M7 1214 aa7.65□□□□□ -1.18
NIPBL-205ENST00000505998 DAPK3O43293 454 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 GPR3P46089 330 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 LGALS4P56470 323 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 TRIM25Q14258 630 aaKnown RBP7.64□□□□□ -1.19
NIPBL-205ENST00000505998 MAN2A1Q16706 1144 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 CCDC178Q5BJE1 867 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 UBXN11Q5T124 520 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 FERMT3Q86UX7 667 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 OSBPL6Q9BZF3 934 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 QRSL1Q9H0R6 528 aaKnown RBP7.64□□□□□ -1.19
NIPBL-205ENST00000505998 CCDC8Q9H0W5 538 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-205ENST00000505998 PRDM12Q9H4Q4 367 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 JADE2Q9NQC1 790 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 NR2E1Q9Y466 385 aa7.64□□□□□ -1.19
NIPBL-205ENST00000505998 AQRO60306 1485 aaKnown RBP eCLIP7.63□□□□□ -1.192e-6■■■■□ 26.3
NIPBL-205ENST00000505998 PRXQ9BXM0 1461 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms