RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-203ENST00000505756 DBR1Q9UK59 544 aaKnown RBP12.71□□□□□ -0.37
KDM3B-203ENST00000505756 MTUS1Q9ULD2 1270 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 EYSQ5T1H1 3165 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 ARID2Q68CP9 1835 aa12.71□□□□□ -0.38
KDM3B-203ENST00000505756 RFXAPO00287 272 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 ATP2C1P98194 919 aaPredicted RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 LAMTOR4Q0VGL1 99 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 GRB10Q13322 594 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 MXD4Q14582 209 aaPredicted RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 KSR1Q8IVT5 923 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 CMTR2Q8IYT2 770 aaKnown RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 ELAC1Q9H777 363 aaKnown RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 IFT122Q9HBG6 1241 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 XPNPEP1Q9NQW7 623 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 CHST12Q9NRB3 414 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 DACT1Q9NYF0 836 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 PCDHB7Q9Y5E2 793 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
KDM3B-203ENST00000505756 TTC3P53804 2025 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 TRANK1O15050 2925 aa12.7□□□□□ -0.38
KDM3B-203ENST00000505756 LPXNO60711 386 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 CSDE1O75534 798 aaKnown RBP12.69□□□□□ -0.38
KDM3B-203ENST00000505756 FGFR4P22455 802 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 CCT6AP40227 531 aaKnown RBP12.69□□□□□ -0.38
KDM3B-203ENST00000505756 FAM189BP81408 668 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 ARL6IP4Q66PJ3 421 aaKnown RBP12.69□□□□□ -0.38
KDM3B-203ENST00000505756 SRGAP1Q7Z6B7 1085 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 TMEM192Q8IY95 271 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 FBXO22Q8NEZ5 403 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 SNX29Q8TEQ0 813 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 GDPD5Q8WTR4 605 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 TMEM161AQ9NX61 479 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 MTCH2Q9Y6C9 303 aa12.69□□□□□ -0.38
KDM3B-203ENST00000505756 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
KDM3B-203ENST00000505756 A0A087WWV3 80 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 USO1O60763 962 aaKnown RBP12.68□□□□□ -0.38
KDM3B-203ENST00000505756 BMP15O95972 392 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 LINC00271P0C7V0 271 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 SRGAP2CP0DJJ0 459 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 IBSPP21815 317 aaPredicted RBP12.68□□□□□ -0.38
KDM3B-203ENST00000505756 ARL2P36404 184 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 PHKA2P46019 1235 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 POU5F1BQ06416 359 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 TFDP1Q14186 410 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
KDM3B-203ENST00000505756 IL17AQ16552 155 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 KRT79Q5XKE5 535 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 CATSPER4Q7RTX7 472 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 RNF149Q8NC42 400 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 MCPH1Q8NEM0 835 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 CLP1Q92989 425 aaKnown RBP12.68□□□□□ -0.38
KDM3B-203ENST00000505756 TRAIPQ9BWF2 469 aa12.68□□□□□ -0.38
KDM3B-203ENST00000505756 A0A0U1RQF3 1178 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 ARHGEF35A5YM69 484 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 C5orf67F2Z3F1 127 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 HOXA2O43364 376 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 RB1P06400 928 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 SKIP12755 728 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 CTNNB1P35222 781 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 BMPR1AP36894 532 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 ECM1Q16610 540 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
KDM3B-203ENST00000505756 ECHDC2Q86YB7 292 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-203ENST00000505756 SLC17A8Q8NDX2 589 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 PPM1EQ8WY54 764 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 POLR3FQ9H1D9 316 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-203ENST00000505756 AGPAT5Q9NUQ2 364 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
KDM3B-203ENST00000505756 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 PIN4Q9Y237 131 aaKnown RBP12.67□□□□□ -0.38
KDM3B-203ENST00000505756 RALGAPA2Q2PPJ7 1873 aa12.67□□□□□ -0.38
KDM3B-203ENST00000505756 VWA3AA6NCI4 1184 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 TBKBP1A7MCY6 615 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 PP2D1A8MPX8 630 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 H3BNC9 293 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 EOMESO95936 686 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 FGFR1P11362 822 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 CYP11B2P19099 503 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 PTMSP20962 102 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 GLRA2P23416 452 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 GATMP50440 423 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 PTENP60484 403 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 KRT85P78386 507 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 GPM6BQ13491 265 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 CAPSQ13938 189 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms