RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 NGRNQ9NPE2 291 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 SPG21Q9NZD8 308 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 PPME1Q9Y570 386 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
PDLIM7-214ENST00000505746 A0A087WZ62 844 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 TMEM150BA6NC51 233 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 EML1O00423 815 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 FSCN2O14926 492 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 PER2O15055 1255 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 P4HBP07237 508 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 DUSP6Q16828 381 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 LRRC55Q6ZSA7 311 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 SMRP1Q8NCR6 262 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 SLC7A3Q8WY07 619 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 FDXACB1Q9BRP7 624 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 MRPL9Q9BYD2 267 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 CYP26B1Q9NR63 512 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 ORC3Q9UBD5 711 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 BARX2Q9UMQ3 279 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.25
PDLIM7-214ENST00000505746 CARNS1A5YM72 827 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 CSDE1O75534 798 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 GLP2RO95838 553 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 AK2P54819 239 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 BMS1Q14692 1282 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 EPHA7Q15375 998 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 TWF2Q6IBS0 349 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 OTUD6AQ7L8S5 288 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 ENTPD7Q9NQZ7 604 aa13.51□□□□□ -0.25
PDLIM7-214ENST00000505746 CTDNEP1O95476 244 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 KRT2P35908 639 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 RFC5P40937 340 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 PHKA2P46019 1235 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 RAB27AP51159 221 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 PLPP4Q5VZY2 271 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 TMEM184AQ6ZMB5 413 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 TMC7Q7Z402 723 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 HELQQ8TDG4 1101 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 HAS1Q92839 578 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-214ENST00000505746 NCOR1O75376 2440 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 GAS2O43903 313 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 PBX3P40426 434 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 NPEPPSP55786 919 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 SMC1AQ14683 1233 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 HERC4Q5GLZ8 1057 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 NCAPH2Q6IBW4 605 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 GLB1LQ6UWU2 654 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 KSR1Q8IVT5 923 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 SLC39A11Q8N1S5 342 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 TCP11Q8WWU5 503 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 PSPC1Q8WXF1 523 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 PGBD4Q96DM1 585 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 LXNQ9BS40 222 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 PHF7Q9BWX1 381 aaPredicted RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 DHX33Q9H6R0 707 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 ZSWIM4Q9H7M6 989 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
PDLIM7-214ENST00000505746 HIDE1A8MVS5 230 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 LOC730098B7Z3J9 87 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 ASAP2O43150 1006 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 ZNF623O75123 536 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 HOXB8P17481 243 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 TECP42680 631 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 BCAR1P56945 870 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 NR5A1Q13285 461 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 KCNC3Q14003 757 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms