RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 CFBP00751 764 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 SP9P0CG40 484 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 MRPS6P82932 125 aaKnown RBP8.11□□□□□ -1.11
VCAN-206ENST00000505615 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 MARCH8Q5T0T0 291 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 GPATCH4Q5T3I0 446 aaKnown RBP8.11□□□□□ -1.11
VCAN-206ENST00000505615 VPS53Q5VIR6 699 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 KIAA0319Q5VV43 1072 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 CES5AQ6NT32 575 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 METTL7BQ6UX53 244 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 STOX1Q6ZVD7 989 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 THNSL1Q8IYQ7 743 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 ADGRF4Q8IZF3 695 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 DNAJB3Q8WWF6 145 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 MRPS27Q92552 414 aaKnown RBP8.11□□□□□ -1.11
VCAN-206ENST00000505615 FTHL17Q9BXU8 183 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 DLGAP2Q9P1A6 1054 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 ZNF215Q9UL58 517 aaPredicted RBP8.11□□□□□ -1.11
VCAN-206ENST00000505615 USTQ9Y2C2 406 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 MRPL11Q9Y3B7 192 aaKnown RBP8.11□□□□□ -1.11
VCAN-206ENST00000505615 DNMT3AQ9Y6K1 912 aaPredicted RBP8.11□□□□□ -1.11
VCAN-206ENST00000505615 SQORQ9Y6N5 450 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 F5P12259 2224 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 SDK1Q7Z5N4 2213 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 FRMPD4Q14CM0 1322 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 TBKBP1A7MCY6 615 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 NOP56O00567 594 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 MGEA5O60502 916 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 CLASP2O75122 1294 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 SARSP49591 514 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 TDGQ13569 410 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 RRP12Q5JTH9 1297 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 RARS2Q5T160 578 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 SPOUT1Q5T280 376 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 UTP14CQ5TAP6 766 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 ZC3H14Q6PJT7 736 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 CYFIP1Q7L576 1253 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 C12orf76Q8N812 135 aaPredicted RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 ZBTB10Q96DT7 871 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 TCF25Q9BQ70 676 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 NGRNQ9NPE2 291 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 ENTPD7Q9NQZ7 604 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 CYP26B1Q9NR63 512 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 TYW1Q9NV66 732 aaKnown RBP8.1□□□□□ -1.11
VCAN-206ENST00000505615 TUBE1Q9UJT0 475 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 PADI3Q9ULW8 664 aa8.1□□□□□ -1.11
VCAN-206ENST00000505615 MYH15Q9Y2K3 1946 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 IGSF9BQ9UPX0 1349 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 NARSO43776 548 aaKnown RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 PPP1R11O60927 126 aaPredicted RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 LAG3P18627 525 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 CCND2P30279 289 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 HOXA13P31271 388 aaPredicted RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 MRPS9P82933 396 aaKnown RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 PPFIA1Q13136 1202 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 ALX1Q15699 326 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 GRIK4Q16099 956 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 FAM102BQ5T8I3 360 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 RSPH3Q86UC2 560 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 MAML2Q8IZL2 1156 aaPredicted RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 TTC14Q96N46 770 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 INPP4AQ96PE3 977 aaPredicted RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 JMJD4Q9H9V9 463 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 TBC1D17Q9HA65 648 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 ZBTB40Q9NUA8 1239 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 FBXL21Q9UKT6 434 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 CDV3Q9UKY7 258 aaKnown RBP8.09□□□□□ -1.11
VCAN-206ENST00000505615 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 TRPV2Q9Y5S1 764 aa8.09□□□□□ -1.11
VCAN-206ENST00000505615 COL4A3Q01955 1670 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 C2orf71A6NGG8 1288 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 SPATA31C2B4DYI2 1134 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 C9IYK1 514 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 EIF5BO60841 1220 aaKnown RBP8.08□□□□□ -1.12
VCAN-206ENST00000505615 SDHBP21912 280 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 TGM1P22735 817 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 PBX3P40426 434 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
VCAN-206ENST00000505615 TBC1D8BQ0IIM8 1120 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 PAK2Q13177 524 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 NEDD9Q14511 834 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 ACAP1Q15027 740 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 TMEM266Q2M3C6 531 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 KCTD15Q96SI1 283 aaPredicted RBP8.08□□□□□ -1.12
VCAN-206ENST00000505615 RTKNQ9BST9 563 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 KCNK12Q9HB15 430 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 TOMM22Q9NS69 142 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 RNF19AQ9NV58 838 aa8.08□□□□□ -1.12
VCAN-206ENST00000505615 DBR1Q9UK59 544 aaKnown RBP8.08□□□□□ -1.12
VCAN-206ENST00000505615 GCN1Q92616 2671 aaKnown RBP8.08□□□□□ -1.12
VCAN-206ENST00000505615 SPAG17Q6Q759 2223 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 MTCL1Q9Y4B5 1905 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 MAST4O15021 2626 aa8.07□□□□□ -1.12
VCAN-206ENST00000505615 KINO60870 393 aaKnown RBP8.07□□□□□ -1.12
VCAN-206ENST00000505615 N4BP1O75113 896 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms